GGGenome Help | Japanese

Database:

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-09 02:18:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Squalius cephalus genome assembly, chromosome: 17.
OX439263.1:678409-678428
AACACACACGGGCCAAATCCTGACTCACAT678409CCTGTGTCATTCAAAACAGAAAGAAACGAGCGGCCTGAAACTCGTCCTGA
Brassica napus cultivar Xiang5A chromosome 13.
CP123888.1:1912106-1912125
CAGTTTGCATTAAGGAGCTCCTGAAGCAAG1912106CCTGTGTCATTCAAAACAGACAGAGTCCAGATCCAGACAACTTGAAATGA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:1006817-1006836
AAGCTTGCATTAAGGATCTCCTGAAACAAG1006817CCTGTGTCATTCAAAACAGACAAAGATGAGTCCAGACAACAAGTTGAAAA
Brassica rapa genome assembly, chromosome: A01.
LS974617.2:37384121-37384140
CAGTTTGCATTAAGGAGCTCCTGAAGCAAG37384121CCTGTGTCATTCAAAACAGACAAAGATGAGAGAGTCCAGATCCAGACAAC
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:1006817-1006836
AAGCTTGCATTAAGGATCTCCTGAAACAAG1006817CCTGTGTCATTCAAAACAGACAAAGATGAGTCCAGACAACAAGTTGAAAA
Acleris literana genome assembly, chromosome: 21.
OX335689.1:4336798-4336817
TATCCAGTTGAATGTCTCTTTGATCGATAT4336798CCTGTGTCATTCAAAACAGATAACGTGTTATATCTTATACAGGGTGTTTG
Trididemnum nubilum genome assembly, chromosome: 2.
OZ014470.1:2196095-2196114
GCCTCCTCCCTGGCTACGCCTATGCCTGAC2196095CCTGTGTCATTCAAAACAGAAAAAAAATTTTTGATTGGCTGAAGGTCTAG
Felis catus Senzu DNA, chromosome: F2, American Shorthair breed.
AP023169.1:55752750-55752769
ATAGGAAACATCAATAGAAATACTTCTACT55752750TCTGTTTTGAATGACACAGGCCACGAGAGTTACACATAGTTGTTTGAGAT
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:46015166-46015185
TCTGTCTGGATCTGGACTCTCTCATCTTTG46015166TCTGTTTTGAATGACACAGGCTTGCTTCAGGAGCTCCTTAATGCAAACTG
Brassica napus genome assembly, chromosome: A01.
HG994355.1:30591182-30591201
TCATTTCAAGTTGTCTGGATCTGGACTCTG30591182TCTGTTTTGAATGACACAGGCTTGCTTCAGGAGCTCCTTAATGCAAACTG
Brassica rapa genome, scaffold: A01.
LR031571.1:36571509-36571528
GTTGTCTGGATCTGGACTCTCTCATCTTTG36571509TCTGTTTTGAATGACACAGGCTTGCTTCAGGAGCTCCTTAATGCAAACTG
Brassica oleracea HDEM genome, scaffold: C1.
LR031878.1:50166812-50166831
GTTGTCTGGATCTGGACTCTCTCATCTTTG50166812TCTGTTTTGAATGACACAGGCTTGCTTCAGGAGCTCCTTAATGCAAACTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:


GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).