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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-11 18:45:47, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CSAD-PNP1242A13 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone CSAD-PNP1242A13 5', mRNA sequence.
DR405300.1:14-35
GGGGAAACTCAAA14CCTTATCTTCATCACCTCCGTCTTTCTCTCTCTCTCTCTCGCTCTCTCAAGA
IC0AAA34CG01RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY273697.1:7-28
CTCAAA7CCTTATCTTCATCACCTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC
CS00-C1-102-006-F07-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY665875.1:42-63
CCTTCCATTTTTAGTTCCTTAAAACTCAAA42CCTTATCTTCATCACCTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC
CS00-C1-102-024-D02-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 2 of 2) Citrus sinensis cDNA, mRNA sequence.
EY666793.1:44-65
CTTCCATTTTTAGTTTCTTACAAACTCAAA44CCTTATCTTCATCACCTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC
CS00-C3-704-052-H07-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY733317.1:41-62
GTTCCATTTTTAGTTTCTTACAAACTCAAA41CCTTATCTTCATCACCTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC
IC0AAA34CG01RM1 IVIA1 Citrus clementina cDNA clone IC0AAA34CG01, mRNA sequence.
FC903062.1:7-28
CTCAAA7CCTTATCTTCATCACCTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC
C34206A03EF PostHarveN Citrus clementina cDNA clone C34206A03, mRNA sequence.
FC932227.1:31-52
GTTCCATTTTTAGTTTCTTACAAACTCAAA31CCTTATCTTCATCACCTCCGTCTCTCTCTCTCTCTCTCGCTCTCTCAAGAGA
Citrus sinensis genome assembly, chromosome: 3.
OY754320.1:11979840-11979861
CTTCCATTTTTAGTTTCTTACAAACTCAAA11979840CCTTATCTTCATCACCTCCGTCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTATCTTCATCACCTCCGTC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTATCTTCATCACCTCCGTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.844 | 0.836 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTATCTTCATCACCTCCGTC&k=0&no_gap=0&offset=0&limit=50
0.968 | 0.124 | search_minus_done; http://172.18.8.135:50400/match?q=GACGGAGGTGATGAAGATAAGG&k=0&no_gap=0&offset=0&limit=42
0.968 | 0.000 | cgi_end;

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