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データベース:

ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 15:06:09, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Elaeis guineensis microsatellite DNA, clone mEgCIR0018.
AJ271634.1:13-32
CCAACATTTTTA13CCTTATTTTCTTTGCTTACCCGCACATATCACCTAGCCCTGAGACCAAAC
Pseudoalteromonas atlantica T6c, complete genome.
CP000388.1:2250105-2250124
TGCTTGGACCAAACGGTGCGGGTAAAAGTA2250105CCTTATTTTCTTTGCTTACCGGTTTAAAGTCTGCCCCGGGAGCTAACGCA
Paraglaciecola mesophila strain GPM4 chromosome, complete genome.
CP047656.1:148170-148189
TGCTTGGACCAAATGGTGCGGGTAAAAGTA148170CCTTATTTTCTTTGCTTACCGGTTTAAAGTCTGCCCCGGGAGCTAACGCA
Ascidiella aspersa genome assembly, chromosome: 4.
OZ004610.1:2602165-2602184
TTTGCCATTCAATATATATAGCTATATTTT2602165CCTTATTTTCTTTGCTTACCCAATGGTACTAAAATCATGTTACATGTATT
Anas platyrhynchos genome assembly, chromosome: 3.
LS423613.1:101007075-101007094
AGAGATCCCTTTTGGGATTAATAAAATCAG101007075GGTAAGCAAAGAAAATAAGGCATTTTTCTCTGCGAAACAACGGAAGGAGA
Sphingobacterium thalpophilum strain NCTC11429 genome assembly, chromosome: 1.
LR590484.1:1681941-1681960
TGCATACATTAGGGCGCTCGGAACTGTCAA1681941GGTAAGCAAAGAAAATAAGGACTTTTATTTCGCCGTAACCCATCTGGATC
Stomorhina lunata genome assembly, chromosome: 3.
OW121742.1:115729640-115729659
CTATGTGAGTCCCTTACTAACCAGCATTTT115729640GGTAAGCAAAGAAAATAAGGCCTTCTTCTAATGAAGAAGAGCATTGCAGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTATTTTCTTTGCTTACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTATTTTCTTTGCTTACC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.157 | 0.148 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTATTTTCTTTGCTTACC&k=0&no_gap=0&offset=0&limit=50
0.282 | 0.125 | search_minus_done; http://172.18.8.135:50400/match?q=GGTAAGCAAAGAAAATAAGG&k=0&no_gap=0&offset=0&limit=46
0.284 | 0.002 | cgi_end;

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