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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-10 01:49:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Lotus japonicus cDNA, clone:MR020a10_f, 3' end.
BP077488.1:311-330
GCTAGCTTCATCATCGCAATTGCTCTTCCA311CCTTCCATTTTCGCTTAGTGAAGTGAAAATTGAAATGAGAATTTGATGAA
LJGBG86TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA sequence.
GO017691.1:285-304
GCTAGCTTCATCATCGCAATTGCTCTTCCA285CCTTCCATTTTCGCTTAGTGAAGTGAAAATTGAAATGAGAATTTGATGAA
LJGBH72TO JCVI-LJ1 Lotus japonicus cDNA 3', mRNA sequence.
GO017758.1:273-292
GCTAGCTTCATCATCGCAATTGCTCTTCCA273CCTTCCATTTTCGCTTAGTGAAGTGAAAATTGAAATGAGAATTTGATGAA
LJNBB96TO JCVI-LJ3 Lotus japonicus cDNA 3', mRNA sequence.
GO041261.1:291-310
GCTAGCTTCATCATCGCAATTGCTCTTCCA291CCTTCCATTTTCGCTTAGTGAAGTGAAAATTGAAATGAGAATTTGATGAA
Lotus japonicus genomic DNA, chromosome 4, clone: LjT47B07, TM0832.
AP007623.2:62686-62705
GCTAGCTTCATCATCGCAATTGCTCTTCCA62686CCTTCCATTTTCGCTTAGTGAAGTGAAAATTGAAATGAGAATTTGATGAA
Lotus japonicus B-129 DNA, chromosome 4, complete sequence.
AP022632.1:6163026-6163045
GCTAGCTTCATCATCGCAATTGCTCTTCCA6163026CCTTCCATTTTCGCTTAGTGAAGTGAAAATTGAAATGAGAATTTGATGAA
Mya arenaria isolate MELC-2E11 chromosome 6.
CP111017.1:2604886-2604905
CTGGTCTAGCATATGACTCTCCATATAAAT2604886CCTTCCATTTTCGCTTAGTGACTCGATCGCCGTTGCTCAGCGTTGAACCG
LJGB287TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO005526.1:122-141
TTCATCAAATTCTCATTTCAATTTTCACTT122CACTAAGCGAAAATGGAAGGTGGAAGAGCAATTGCGATGATGAAGCTAGC
LJGBG86TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO008113.1:117-136
TTCATCAAATTCTCATTTCAATTTTCACTT117CACTAAGCGAAAATGGAAGGTGGAAGAGCAATTGCGATGATGAAGCTAGC
LJGBH72TF JCVI-LJ1 Lotus japonicus cDNA 5', mRNA sequence.
GO008296.1:122-141
TTCATCAAATTCTCATTTCAATTTTCACTT122CACTAAGCGAAAATGGAAGGTGGAAGAGCAATTGCGATGATGAAGCTAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTCCATTTTCGCTTAGTG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTCCATTTTCGCTTAGTG | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.740 | 0.731 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTCCATTTTCGCTTAGTG&k=0&no_gap=0&offset=0&limit=50
1.078 | 0.338 | search_minus_done; http://172.18.8.135:50400/match?q=CACTAAGCGAAAATGGAAGG&k=0&no_gap=0&offset=0&limit=43
1.080 | 0.002 | cgi_end;

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