GGGenome | Results

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2025-04-08 12:27:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

KS09075G10 KS09 Capsicum annuum cDNA, mRNA sequence.
CA517217.1:196-217

CACTTAAAATATNGGTTCTTCGTTTTTATT196CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

KS16048D08 KS16 Capsicum annuum cDNA, mRNA sequence.
GD073952.1:172-193

CACTTAAAATATCGGTTCTTCGTTTTTATT172CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTGGT

KS18003G06 KS18 Capsicum annuum cDNA, mRNA sequence.
GD081789.1:170-191

CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

KS18011H10 KS18 Capsicum annuum cDNA, mRNA sequence.
GD082553.1:170-191

CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

KS18015H06 KS18 Capsicum annuum cDNA, mRNA sequence.
GD082920.1:170-191

CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

KS18039C02 KS18 Capsicum annuum cDNA, mRNA sequence.
GD085095.1:170-191

CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

KS18054D12 KS18 Capsicum annuum cDNA, mRNA sequence.
GD086478.1:170-191

CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

KS18060G02 KS18 Capsicum annuum cDNA, mRNA sequence.
GD087055.1:170-191

CACTTAAAATATCGGTTCTTCGTTTTTATT170CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

TSA: Capsicum annuum CMCs80_70167, mRNA sequence.
JW114750.1:217-238

CACTTAAAATATCGGTTCTTCGTTTTTATT217CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTCTT

Capsicum annuum cultivar G1-36576 isolate CaT2T chromosome 6.
CP124726.1:34487666-34487687

CACTTAAAATATCGGTTCTTCGTTTTTATT34487666CCTTCGCACTTTCTTCCTCACAGTCTTTCTCTGCCTCTTCAGTTTTGGTGTA

TSA: Capsicum annuum MGMT_Contig27698, mRNA sequence.
JW077942.1:490-511

AAGACCAAAACTGAAGAGGCAGAGAAAGAC490TGTGAGGAAGAAAGTGCGAAGGAATAAAAACGAAGAACCGATATTTTAAGTG

Capsicum annuum Takanotsume DNA, chromosome 6, sequence.
AP026701.1:218786016-218786037

TACACCAAAACTGAAGAGGCAGAGAAAGAC218786016TGTGAGGAAGAAAGTGCGAAGGAATAAAAACGAAGAACCGATATTTTAAGTG

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

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Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTTCGCACTTTCTTCCTCACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTCGCACTTTCTTCCTCACA | format : html | download : | debug :

0.008 | 0.008 | search_start;
0.800 | 0.792 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTCGCACTTTCTTCCTCACA&k=0&no_gap=0&offset=0&limit=50
0.860 | 0.059 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGAGGAAGAAAGTGCGAAGG&k=0&no_gap=0&offset=0&limit=40
0.861 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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