GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 10:37:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lotus japonicus genomic DNA, chromosome 1, clone: LjT47J05, TM0295.
AP007314.2:7640-7659
GAGAGAGAGAGAGAGAGAAGGATTGAGGAA7640CCTTCGTTGCTCACCCTCATCGCCTTCTTCGTCGTTCTCGCTCTCACCGT
Hedya salicella genome assembly, chromosome: 18.
FR990114.1:20452481-20452500
TACCATTTCGCATCAAAATTTTATTTTTAA20452481CCTTCGTTGCTCACCCTCATTCCACTGCGGGCACAGTCTCTCACCTCCGT
Lotus japonicus genomic DNA, clone: LjB20E08, BM2151.
AP010877.1:66101-66120
ACGGTGAGAGCGAGAACGACGAAGAAGGCG66101ATGAGGGTGAGCAACGAAGGTTCCTCAATCCTTCTCTCTCTCTCTCTCTC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:127719941-127719960
ACGGTGAGAGCGAGAACGACGAAGAAGGCG127719941ATGAGGGTGAGCAACGAAGGTTCCTCAATCCTTCTCTCTCTCTCTCTCTC
Rhizobium sullae strain WSM1592 chromosome, complete genome.
CP104143.1:694828-694847
GGCGCGATCCCGGTTGATGTCCGAAGGTCA694828ATGAGGGTGAGCAACGAAGGAGCGAACGTCTGGCGGCAAGCAAAGACGAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTTCGTTGCTCACCCTCAT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTCGTTGCTCACCCTCAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.096 | 0.087 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTCGTTGCTCACCCTCAT&k=0&no_gap=0&offset=0&limit=50
0.112 | 0.016 | search_minus_done; http://172.18.8.135:50400/match?q=ATGAGGGTGAGCAACGAAGG&k=0&no_gap=0&offset=0&limit=48
0.115 | 0.002 | cgi_end;

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