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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:26:27, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lotus japonicus genomic DNA, chromosome 2, clone: LjT31J14, TM1247.
AP007926.2:80775-80795
TTGGCTCAGCTCCGGTCGACGGTTGTGAAG80775CCTTGGATGGTGGTGGGTGACTTCAATGAGATTCTCTACCCATCGGAGGTC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:92827609-92827629
TTGGCTCAGCTCCGGTCGACGGTTGTGAAG92827609CCTTGGATGGTGGTGGGTGACTTCAATGAGATTCTCTACCCATTGGAGGTC
Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring.
HG670306.1:730234031-730234051
CTGCGAGAGTTACATGTTCTGATGAATATG730234031CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR862516.1:299179106-299179126
CTGCGAGAGTTGCATGTGATGATGAATATC299179106CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR862536.1:777370764-777370784
CTGCGAGAGTTACATGTTCTGATGAATATG777370764CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR862537.1:301872514-301872534
CTGCGAGAGTTGCATGTGATGATGAATATC301872514CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR862557.1:824661245-824661265
CTGCGAGAGTTACATGTTCTGATGAATATG824661245CCTTGGATGGTGGTGGGTGACATGAATGAGATCTTGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR862557.1:824747312-824747332
CTGCGAGAGTTACATGTTCTGATGAATATG824747312CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTAAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR862558.1:304272338-304272358
CTGCGAGAGTTGCATGTGATGATGAATATC304272338CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR865466.1:296929200-296929220
CTGCGAGAGTTGCATGTGATGATGAATATC296929200CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR865486.1:771278987-771279007
CTGCGAGAGTTACATGTTCTGATGAATATG771278987CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR865487.1:307528621-307528641
CTGCGAGAGTTGCATGTGATGATGAATATC307528621CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR865507.1:794088581-794088601
CTGCGAGAGTTACATGTTCTGATGAATATG794088581CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR865508.1:304345275-304345295
CTGCGAGAGTTGCATGTGATGATGAATATC304345275CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR865746.1:794021373-794021393
CTGCGAGAGTTACATGTTCTGATGAATATG794021373CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR865747.1:310224355-310224375
CTGCGAGAGTTGCATGTGATGATGAATATC310224355CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR865767.1:772875740-772875760
CTGCGAGAGTTACATGTTCTGATGAATATG772875740CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR865767.1:772948573-772948593
CTGCGAGAGTTACATGTTCTGATGAATATG772948573CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR865767.1:773006798-773006818
CTGCGAGAGTTACATGTTCTGATGAATATG773006798CCTTGGATGGTGGTGGGTGACATGAATGAGATCTTGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR865767.1:773081843-773081863
CTGCGAGAGTTACATGTTCTGATGAATATG773081843CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTAAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR865768.1:296534724-296534744
CTGCGAGAGTTGCATGTGATGATGAATATC296534724CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR877316.1:785030479-785030499
CTGCGAGAGTTACATGTTCTGATGAATATG785030479CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR877317.1:302204550-302204570
CTGCGAGAGTTGCATGTGATGATGAATATC302204550CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LR878442.1:787293394-787293414
CTGCGAGAGTTACATGTTCTGATGAATATG787293394CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LR878443.1:298414671-298414691
CTGCGAGAGTTGCATGTGATGATGAATATC298414671CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:767858502-767858522
CTGCGAGAGTTACATGTTCTGATGAATATG767858502CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:767895453-767895473
CTGCGAGAGTTACATGTTCTGATGAATATG767895453CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:767972992-767973012
CTGCGAGAGTTACATGTTCTGATGAATATG767972992CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:768077339-768077359
CTGCGAGAGTTACATGTTCTGATGAATATG768077339CCTTGGATGGTGGTGGGTGACATGAATGAGATCTTGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
LS992087.1:768172004-768172024
CTGCGAGAGTTACATGTTCTGATGAATATG768172004CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTAAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
LS992088.1:298046070-298046090
CTGCGAGAGTTGCATGTGATGATGAATATC298046070CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:779241953-779241973
CTGCGAGAGTTACATGTTCTGATGAATATG779241953CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:779281048-779281068
CTGCGAGAGTTACATGTTCTGATGAATATG779281048CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:779349402-779349422
CTGCGAGAGTTACATGTTCTGATGAATATG779349402CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:779445035-779445055
CTGCGAGAGTTACATGTTCTGATGAATATG779445035CCTTGGATGGTGGTGGGTGACATGAATGAGATCTTGTATAATTTTGAGAAG
Triticum turgidum subsp. durum genome assembly, chromosome: 3B.
LT934116.1:779528870-779528890
CTGCGAGAGTTACATGTTCTGATGAATATG779528870CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTAAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
OU015728.1:789425048-789425068
CTGCGAGAGTTACATGTTCTGATGAATATG789425048CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
OU015729.1:324716810-324716830
CTGCGAGAGTTGCATGTGATGATGAATATC324716810CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
OU343178.1:795459744-795459764
CTGCGAGAGTTACATGTTCTGATGAATATG795459744CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
OU343185.1:315510264-315510284
CTGCGAGAGTTGCATGTGATGATGAATATC315510264CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
OU963879.1:785324687-785324707
CTGCGAGAGTTACATGTTCTGATGAATATG785324687CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
OU963880.1:304749853-304749873
CTGCGAGAGTTGCATGTGATGATGAATATC304749853CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
OV100744.1:788336373-788336393
CTGCGAGAGTTACATGTTCTGATGAATATG788336373CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
OV100745.1:303099002-303099022
CTGCGAGAGTTGCATGTGATGATGAATATC303099002CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3B.
OW530317.1:788336373-788336393
CTGCGAGAGTTACATGTTCTGATGAATATG788336373CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
OW530318.1:303099002-303099022
CTGCGAGAGTTGCATGTGATGATGAATATC303099002CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 1.
OX392547.1:32218076-32218096
ATGGAGCAAAATCTGCCTCCTGACCAAACT32218076CCTTGGATGGTGGTGGGTGACCTAAATGAGGTCAGGAATCAAAATGAAAAA
Vicia faba genome assembly, chromosome: 1L.
OX451736.1:911300587-911300607
ATTGAACAAATTGCTTACACTACTCAGGAT911300587CCTTGGATGGTGGTGGGTGACTATAATAATGTTCTGCATACTATGGATCGT
Triticum aestivum genome assembly, chromosome: 3B.
OX637232.1:687424053-687424073
CTGCGAGAGTTACATGTTCTGATGAATATG687424053CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Triticum aestivum genome assembly, chromosome: 3D.
OX637233.1:236404923-236404943
CTGCGAGAGTTGCATGTGATGATGAATATC236404923CCTTGGATGGTGGTGGGTGACATGAATGAGACCATGTATAATTTTGAGAAG
Ilex aquifolium genome assembly, chromosome: 13.
OX637403.1:22884959-22884979
CATTTGACTGGGCTACCAGTTTCTAATGCT22884959CCTTGGATGGTGGTGGGTGACTTCAATACAATCGTCTCATCAGCGGAAAGA
Phragmites australis genome assembly, chromosome: 24.
OY282635.1:11632474-11632494
TTACGTAATATTAGAGCCTTGTGTGATGGC11632474CCTTGGATGGTGGTGGGTGACTTCAATCTTATTTATCAGGCAGCAGATAAG
Alisma plantago-aquatica genome assembly, chromosome: 1.
OY856409.1:480986600-480986620
ATGTTGTTGTTGAATACAGTTTCCATCTAT480986600CCTTGGATGGTGGTGGGTGACCTTAACATTGATACAGGTTAGCTCAAGAAG
Triticum timopheevii genome assembly, chromosome: 3G.
OY997266.1:617219882-617219902
CTGCGAGAGTTACATGTTCTGATGAATATG617219882CCTTGGATGGTGGTGGGTGACATGAATGAGATCATGTATAATTTTGAGAAG
Meconema thalassinum genome assembly, chromosome: 1_1.
OX336388.2:1135576696-1135576716
GCTGCGTAGACACGTACAGATAATCATTTT1135576696CCTTGGATGGTGGTGGGTGACGCAGATCTCCTGATTCCCACACAAGAGCTA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTGGATGGTGGTGGGTGAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTGGATGGTGGTGGGTGAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.197 | 0.188 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTGGATGGTGGTGGGTGAC&k=0&no_gap=0&offset=0&limit=50
0.338 | 0.142 | search_minus_done; http://172.18.8.135:50400/match?q=GTCACCCACCACCATCCAAGG&k=0&no_gap=0&offset=0&limit=0
0.338 | 0.000 | cgi_end;

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