GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 07:49:22, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

G969P312FN2.T0 Phytophthora infestans T30-4 NORMALIZED Phytophthora infestans cDNA, mRNA sequence.
GR285430.1:510-529
ATTTCGCAAGCGTCGGGCTTACAACATTCC510CTCTCCATAATCACGAAAGGAGTGTCAATTGGTGTGGAATTATACGCGCT
Lotus japonicus genomic DNA, chromosome 3, clone: LjT14C19, TM0190.
AP006105.1:46080-46099
AAATTCAAAATAATTCAAATAATAATTTTT46080CTCTCCATAATCACGAAAGGAACACTAATTATAATTATTTTCATTTATCA
Lotus japonicus B-129 DNA, chromosome 3, complete sequence.
AP022631.1:19636889-19636908
AAATTCAAAATAATTCAAATAATAATTTTT19636889CTCTCCATAATCACGAAAGGAACACTAATTATAATTATTTTCATTTATCA
Trifolium fragiferum genome assembly, chromosome: 6.
OX940794.1:10528640-10528659
GTGCTCATGAATTAATTTAAGGTTCTTGAT10528640CTCTCCATAATCACGAAAGGCCTCTTGCAAATCTTCCTCTTGAGCTTCCC
Dexiosoma caninum genome assembly, chromosome: 1.
OZ004725.1:37326119-37326138
CGTGCGGTCGAGCTTTTAAAGAACTTTCTA37326119CTCTCCATAATCACGAAAGGATACATAGTGGAGAGAAACCATTTAAGTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CCTTTCGTGATTATGGAGAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTTCGTGATTATGGAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.091 | 0.082 | search_plus_done; http://172.18.8.135:50400/match?q=CCTTTCGTGATTATGGAGAG&k=0&no_gap=0&offset=0&limit=50
0.199 | 0.109 | search_minus_done; http://172.18.8.135:50400/match?q=CTCTCCATAATCACGAAAGG&k=0&no_gap=0&offset=0&limit=50
0.203 | 0.004 | cgi_end;

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