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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 21:53:23, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Strongylocentrotus purpuratus clone R3-32B17, WORKING DRAFT SEQUENCE, 6 unordered pieces.
AC149953.2:128743-128762
AACTCTCTGTTAAAGTCTATGAGTCAGCGC128743CCTTTTGGCTCCAAACACATTCCTCCCCCGGATCTTGTAAATTCATTTCT
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:62348260-62348279
TGGCATAGTATTGAGGGTTATAGTTGTTTG62348260CCTTTTGGCTCCAAACACATAATTTTCTTTGTTTCCACTCTTCCATTCTT
Tamarix gallica genome assembly, chromosome: 1.
OZ123701.1:64135227-64135246
ATGCCCCAATCGTGTTTTCTCCCTCGATCT64135227CCTTTTGGCTCCAAACACATGTACGCGACAATCCATGTAATACTACACAC
Scrobipalpa ocellatella genome assembly, chromosome: 24.
OZ218594.1:21465890-21465909
AATTGGTTTTGTACTTTTTTTAAATCTTGC21465890CCTTTTGGCTCCAAACACATCAGGCGTCACGTTCCGCGGCGGAATCTTCA
Fringilla coelebs genome assembly, chromosome: 1.
OY740724.1:134558665-134558684
AGTTTTCAGGGACTCCCGAACACCACAAGC134558665CCTTTTGGCTCCAAACACATTCCACTTAATTAACGTTGCCTCATTTTACA
Apodemus agrarius genome assembly, chromosome: 12.
OZ030017.1:88097897-88097916
ATGTGTGTCTGCATGTCTGCATGCCATGGA88097897ATGTGTTTGGAGCCAAAAGGACAACTTTCAAGAATTGATTTTCTCTTTCT
Strongylocentrotus purpuratus clone R3-18J23, WORKING DRAFT SEQUENCE, 21 unordered pieces.
AC176040.1:105988-106007
AGAAATGAATTTACAAGATCCGGGGGAGGA105988ATGTGTTTGGAGCCAAAAGGGCGCTGACTCATAGACTTTAACAGAGAGTT
Brassica napus cultivar Xiang5A chromosome 19.
CP151914.1:6202948-6202967
AAGAATGGAAGAGTGGAAACAAAGAAAATT6202948ATGTGTTTGGAGCCAAAAGGCAAACAACTATAACCCTCAATACTATGCCA
Brassica napus genome assembly, chromosome: C09.
HG994373.1:6784772-6784791
AAGAATGGAAGAGTGGAAACAAAGAAAATT6784772ATGTGTTTGGAGCCAAAAGGCAAACAACTATAACCCTCAATACTATGCCA
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:6863743-6863762
AAGAATGGAAGAGTGGAAACAAAGAAAATT6863743ATGTGTTTGGAGCCAAAAGGCAAACAACTATAACCCTCCATACTATGCCA
Astragalus alpinus genome assembly, chromosome: 7.
OZ076764.1:67421068-67421087
CAATGTGAATTGGTGGTGTAGTGGTTAGGA67421068ATGTGTTTGGAGCCAAAAGGCTATGGGTTGGATTTGGAATCCCTTTTATA
Astragalus alpinus genome assembly, chromosome: 7.
OZ076821.1:64057576-64057595
CAATGTGAATTGGTGGTGTAGTGGTTAGGA64057576ATGTGTTTGGAGCCAAAAGGCTATGGGTTGGATTTGGAATCCCTTTTATA
Tamarix gallica genome assembly, chromosome: 11.
OZ123711.1:3868991-3869010
GTGTGTAGTCTAACATGGATTCATATATAC3868991ATGTGTTTGGAGCCAAAAGGAGATCAAATGAGAAAACAAAAGGGCCTTAT
Mesocentrotus franciscanus isolate Mf1 chromosome 15.
CP137680.1:26761491-26761510
TTGATATACCGGTACTGTACTGTACATGTG26761491ATGTGTTTGGAGCCAAAAGGACATTGAGTCTGTGTTAAAGTATAAGTCTT
Donax trunculus genome assembly, chromosome: 6.
OZ187426.1:61224139-61224158
TTTCGCAGCACAGGTATAAATCTTTGCAGA61224139ATGTGTTTGGAGCCAAAAGGGTAAGTCATATATGGCTCAGATGTAAACAT
Scrobipalpa ocellatella genome assembly, chromosome: 24.
OZ218594.1:20366049-20366068
CGAAGATTCCGCCGCGGAACGTGACGCCTG20366049ATGTGTTTGGAGCCAAAAGGGCAAGATTTTAAAAAAGTACAAAACTAATT
Scrobipalpa ocellatella genome assembly, chromosome: 24.
OZ218594.1:20605615-20605634
CGAAGATTCCGCCGCGGAACGTGACGCCTG20605615ATGTGTTTGGAGCCAAAAGGGCAAGATTTTAAAAAAGTACAAAACTAATT
Scrobipalpa ocellatella genome assembly, chromosome: 24.
OZ218594.1:20781533-20781552
CGAAGATTCCGCCGCGGAACGTGACGCCTG20781533ATGTGTTTGGAGCCAAAAGGGCAAGATTTTAAAAAAGTACAAAACTAATT
Scrobipalpa ocellatella genome assembly, chromosome: 24.
OZ218594.1:20867600-20867619
CGAAGATTCCGCCGCGGAACGTGACGCCTG20867600ATGTGTTTGGAGCCAAAAGGGCAAGATTTTAAAAAAGTACAAAACTAATT
Scrobipalpa ocellatella genome assembly, chromosome: 24.
OZ218594.1:21264149-21264168
CGAAGATTCCGCCGCGGAACGTGACGCCTG21264149ATGTGTTTGGAGCCAAAAGGGCAAGATTTTAAAAAAGTACAAAACTAATT
Scrobipalpa ocellatella genome assembly, chromosome: 24.
OZ218594.1:21381628-21381647
CGAAGATTCCGCCGCGGAACGTGACGCCTG21381628ATGTGTTTGGAGCCAAAAGGGCTAGATTTAAAAAAACTACAAAACTAATT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CCTTTTGGCTCCAAACACAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CCTTTTGGCTCCAAACACAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.313 | 0.304 | search_plus_done; http://172.18.8.135:50800/match?q=CCTTTTGGCTCCAAACACAT&k=0&no_gap=0&offset=0&limit=50
0.457 | 0.144 | search_minus_done; http://172.18.8.135:50800/match?q=ATGTGTTTGGAGCCAAAAGG&k=0&no_gap=0&offset=0&limit=45
0.468 | 0.011 | cgi_end;

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