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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2026-02-07 13:09:56, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS2F951JQ RS2(RS) Raphanus sativus cDNA 3', mRNA sequence.
FD574108.1:91-112
TCTAGTAACAGGAAAAAACAACATGAAAAA91CGAAACACACAACACACAACACCAAAAAAGAAAAAGGGGAACACAACAACAA
RS1GD76JQ RS1(AR) Raphanus sativus var. oleiformis cDNA 3', mRNA sequence.
FD935530.1:109-130
CTAGTAACAGGAAAAAAACAACATGAAAAA109CGAAACACACAACACACAACACCAAAAAAAAGAAAAAGGGGAACAACAATGT
Ustilago hordei strain Uh805 chromosome 11.
CP094216.1:628071-628092
AAGCATGCTTCTAGCCTCGACACGACACTC628071CGAAACACACAACACACAACACACAACACACAACACACACGATCGACGAAGC
Euglena gracilis isolate CCAP 1224/5Z chromosome 42.
CP154995.1:22381634-22381655
ACACACAAACACCACACACACAAGCACACA22381634CGAAACACACAACACACAACACCAACAACACACACAACACACACAACACACA
Polygonum aviculare genome assembly, chromosome: 2.
OW204024.1:5857470-5857491
TCGTCCACGACCATGACAATCACACAATCA5857470CGAAACACACAACACACAACACAAAGACTAGAGGGGTCGGCAACGGCCTATG
Pulicaria dysenterica genome assembly, chromosome: 3.
OX359290.1:40450188-40450209
CTCTCAAATTCTCGGCTCTCTCTCTATAAC40450188CGAAACACACAACACACAACACACAAACAAGATATTTGACAAAGCATTGCGT
Gibbula magus genome assembly, chromosome: 5.
OW388293.1:3849374-3849395
CTTAATTAATTCACATATGATGAAACAAAT3849374CGAAACACACAACACACAACACTTTGTCTAGTGACCATTGTTTCAGCGTTTA
Anopheles maculipalpis genome assembly, chromosome: 3.
OX030896.1:62476370-62476391
ATACACAGTTTTAACAAGTACCATAGCAAT62476370CGAAACACACAACACACAACACTGAGCGGATGTGAATAGAATAAAAAAAAAC
Schistosoma mattheei genome assembly, chromosome: 5.
OX103946.1:11809549-11809570
GAGTGTTCGTGCCACACTGTTTCACGTCAC11809549CGAAACACACAACACACAACACACAACACACACACACGCACTTACAAACACA
Schistosoma mattheei genome assembly, chromosome: 5.
OX103946.1:11822684-11822705
GAGTGTTCGTGCCACACTGTTTCACGTCAC11822684CGAAACACACAACACACAACACACAAACACACACACGCACTTACAAACACAC
Lacanobia wlatinum genome assembly, chromosome: 30.
OX388052.1:5394015-5394036
ATATTTACAAACATTAATAAACATTTAATA5394015CGAAACACACAACACACAACACACAAACACAACACACAAAACACACACACAC
Cheilosia impressa genome assembly, chromosome: 4.
OX411883.1:41526152-41526173
AATTTGCGAAAAACTCTCGAAAATAAAACG41526152CGAAACACACAACACACAACACACCCTCTCATTGGATACACACGTCTGCGAT
Cheilosia variabilis genome assembly, chromosome: 4.
OX579679.1:47421308-47421329
AATTTGCGAAAAACTCTCGAAAATGAAACG47421308CGAAACACACAACACACAACACACCCTCTCATTGGCTACACGTCTGCGATGT
Aporrectodea icterica genome assembly, chromosome: 1.
OY744602.1:22210970-22210991
CCGTGTAGATCTGTGCATGATTGAAGTGAC22210970CGAAACACACAACACACAACACAAAACATCAAAAAAAGTATTGGCTTACGGG
Drosophila obscura genome assembly, chromosome: 2.
OY757208.1:2484680-2484701
GAAAGATAAAGAATGAAGCTACAAAAGCAG2484680CGAAACACACAACACACAACACACACAACACACACAACACACACAGGATGAG
Escarpia spicata genome assembly, chromosome: 7.
OZ023211.1:33486902-33486923
AGATATATACATAGATACATACACGTGGTA33486902CGAAACACACAACACACAACACGCACATGAACTCAGACCAACTAGATGGTGA
Drosophila obscura genome assembly, chromosome: 1.
OZ030368.1:2477200-2477221
GAAAGATAAAGAATGAAGCTACAAAAGCAG2477200CGAAACACACAACACACAACACACACAACACACACAACACACACAGGATGAG
Cepaea nemoralis genome assembly, chromosome: 16.
OZ071533.1:1383508-1383529
ACACACATCACACACACAACACACAACACA1383508CGAAACACACAACACACAACACACACAACACACAGCACACACACAACACACA
Cepaea nemoralis genome assembly, chromosome: 17.
OZ073251.1:1373584-1373605
ACACACATCACACACACAACACACAACACA1373584CGAAACACACAACACACAACACACACAACACACAGCACACACACAACACACA
Mellicta aurelia genome assembly, chromosome: 27.
OZ183878.1:4468497-4468518
TTACTAGGATTACTCCTGTGTCGGGGGTCA4468497CGAAACACACAACACACAACACACAAGCACAAACACCCAGACCATGGCAAAT
Corallium rubrum genome assembly, chromosome: 15.
OZ184035.1:1454866-1454887
CAAAACAAAACAAAACAAAACGAAACGAAA1454866CGAAACACACAACACACAACACACAACACACAACACACAACACACAACACAC
Dolichomitus mesocentrus genome assembly, chromosome: 12.
OZ187119.1:9973797-9973818
CATGCAACACGAAATACAAAACATGCAACA9973797CGAAACACACAACACACAACACGATATACACAATACAAAATACGCAACACGA
Polypogon plumigeralis genome assembly, chromosome: 12.
OZ210424.1:11371544-11371565
GCGTAATTGGCGGACATACTTAAAAGAAAA11371544CGAAACACACAACACACAACACACATACAGACGAACATAGAACCTCCTCCTT
Pollachius pollachius genome assembly, chromosome: 2.
OX465125.1:14353251-14353272
TGCACCCATTATCGCAGACCTACAGACACA14353251CGAAACACACAACACACAACACCTCAATCAGAAGGAGAGCGAGGCAAGCCTT
Myxine glutinosa genome assembly, chromosome: 5.
OZ076427.1:11742271-11742292
CACACACACACACACACACACACACACACA11742271CGAAACACACAACACACAACACCAACCAACCACCTACCTTTACAACATACAC
Scardinius erythrophthalmus genome assembly, chromosome: 2.
OZ078835.1:833702-833723
ACAGGCAAACACACAACACAGCTGACACAG833702CGAAACACACAACACACAACACAGCTGACACAGGGAAACACACAACACAGCT
Pipistrellus nathusii genome assembly, chromosome: 6.
OY883183.1:85948767-85948788
TGGTGTGTGTGTGCTGTGTGGTGTGTGTGT85948767GTGTTGTGTGTTGTGTGTTTCGTGTGCGGTGTGTGTGTGTGGTTTGGTGTGC
RS3C518TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EX904163.1:564-585
TACATTGTTGTTCCCCTTTTTCTTTTTTTG564GTGTTGTGTGTTGTGTGTTTCGTTTTTCACGTTGTTTTTTTCCTGTTACTAG
RS3C754TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EX904357.1:558-579
ACATTGTTGTTCCCCTTTTTCTTTTTTTTG558GTGTTGTGTGTTGTGTGTTTCGTTTTTCATGTTGTTTTTTTCCTGTTACTA
RS2F951TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
FD570018.1:567-588
TTGTTGTTGTGTTCCCCTTTTTCTTTTTTG567GTGTTGTGTGTTGTGTGTTTCGTTTTTCATGTTGTTTTTTCCTGTTACTAGA
RS3EI84TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
FD576815.1:564-585
TACATTGTTGTTCCCCTTTTTCTTTTTTCG564GTGTTGTGTGTTGTGTGTTTCGTTTTTCATGTTGTTTTTTTCCTGTTACTAG
RS1GD76TF RS1(AR) Raphanus sativus var. oleiformis cDNA 5', mRNA sequence.
FD939399.1:568-589
ACATTGTTGTTCCCCTTTTTCTTTTTTTTG568GTGTTGTGTGTTGTGTGTTTCGTTTTTCATGTTGTTTTTTTCCTGTTACTAG
Euglena gracilis isolate CCAP 1224/5Z chromosome 9.
CP154962.1:56845201-56845222
GCGTGTTGCGTGTTGTGTGTTGTGTGTTGT56845201GTGTTGTGTGTTGTGTGTTTCGTGGTGTGTGTTGTGTGTTGTGTGTTGTGTG
Euglena gracilis isolate CCAP 1224/5Z chromosome 42.
CP154995.1:23507507-23507528
TTGTGTGTTGTGTGTTGTGTGTTGTGTGTT23507507GTGTTGTGTGTTGTGTGTTTCGTGTGTGCTTGTGTGTGTGGTGTTTGTGTGT
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:16265391-16265412
TTACATTGTTGTTCCCCTTTTTCTTTTTTG16265391GTGTTGTGTGTTGTGTGTTTCGTTTTTCATGTTGTTTTTTTCCTGTTACTAG
Pulicaria dysenterica genome assembly, chromosome: 5.
OX359292.1:19259620-19259641
AAGCAATGTTTTATGAAAGATCTTGTTTGT19259620GTGTTGTGTGTTGTGTGTTTCGGTTGTAGAGAGCGAGCCGAGAAGTGGAGAG
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:16265391-16265412
TTACATTGTTGTTCCCCTTTTTCTTTTTTG16265391GTGTTGTGTGTTGTGTGTTTCGTTTTTCATGTTGTTTTTTTCCTGTTACTAG
Matricaria chamomilla genome assembly, chromosome: 9.
OZ174304.1:111519023-111519044
GCAAATCGGGGGTGTTTTATATTTGTGTTT111519023GTGTTGTGTGTTGTGTGTTTCGGATGTTTACAACTTATTTTTAAGCTTATCT
Salinibacterium hongtaonis strain CGMCC 1.16371 chromosome, complete genome.
CP026951.1:2335506-2335527
GTCGCGGCTTGTGCGGTTGCTGCGTGTTGT2335506GTGTTGTGTGTTGTGTGTTTCGGGTCATAGTGCGCGCCTGGGCTGGGCCGAC
Leucozona laternaria genome assembly, chromosome: 1.
OW026366.1:241865615-241865636
ATCTGGAGCTGGTAAGTGCACTTTGATGTT241865615GTGTTGTGTGTTGTGTGTTTCGTTTCGTTCGTAGCTTAGCTAATTTTCAGCC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13390371-13390392
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13390371GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13395347-13395368
GTGTGTGTGTGTGTGCGTGCGTGTGTTTGT13395347GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13397295-13397316
GTGTGTGTGTGCGTGCGTGCGTGTGTTTGT13397295GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13399243-13399264
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13399243GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13400217-13400238
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13400217GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13401191-13401212
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13401191GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13402165-13402186
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13402165GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13403075-13403096
GTGTGCGTGTGCGTGCGTGTGTGTGTTTGT13403075GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13403967-13403988
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13403967GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13404877-13404898
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13404877GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13405833-13405854
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13405833GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13407704-13407725
GTGTGTGCGTGTGTGTGTGTGTGGGTTTGT13407704GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13408609-13408630
GTGTGTGCGTGCGTGTGTGTGTGGGTTTGT13408609GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13409510-13409531
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13409510GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13411435-13411456
GTGTGTGCGTGCGTGTGTGTGTGGGTTTGT13411435GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13412404-13412425
GTGTGTGCGTGCGTGTGTGTGTGGGTTTGT13412404GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13413360-13413381
GTGTGCGTGTGCGTGCGTGTGTGTGTTTGT13413360GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13417181-13417202
GTGTGTGTGTGCGTGTGTGTGTGTGTTTGT13417181GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13419124-13419145
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13419124GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13422970-13422991
GTGTGTGTGTGTGTGCGTGTGTGTGTTTGT13422970GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13425857-13425878
GTGTGTGTGTGTGCGTGTGTGTGTGTGTTT13425857GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13431516-13431537
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13431516GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Schistosoma haematobium genome assembly, chromosome: 5.
OX103966.1:13432455-13432476
GTGTGTGTGTGCGTGCGTGTGTGTGTTTGT13432455GTGTTGTGTGTTGTGTGTTTCGGTGACGTGAAACAGTGTGGCACGAACACTC
Drosophila obscura genome assembly, chromosome: 2.
OY757202.1:11016327-11016348
CTCATCCTGTGTGTGTTGTGTGTGTTGTGT11016327GTGTTGTGTGTTGTGTGTTTCGCTGCTTTTGTAGCTTCATTCTTTATCTTTC
Convolutriloba macropyga genome assembly, chromosome: 14.
OZ077312.1:35418948-35418969
TTGAGAGAGAGAGGGTGTGTGAGTGTGTGT35418948GTGTTGTGTGTTGTGTGTTTCGTGTGTGTGATTGTGTGTTGTGTGTGTGAGT
Loboptera subterranea genome assembly, chromosome: 2.
OZ195658.1:119822131-119822152
AATTGAATGATTGCTACTAGATGGTGGACT119822131GTGTTGTGTGTTGTGTGTTTCGCCAAAACAGTGAACGTCTTAAGCGACGTCA
Bolma rugosa genome assembly, chromosome: 5.
OZ209840.1:6806400-6806421
GTGTGTGTGTGTGTGTGTTTTGTGTGTTGT6806400GTGTTGTGTGTTGTGTGTTTCGTGTTGTGTGTTGTGTTGTGTGTGTTGTGTG
Phyllodoce medipapillata genome assembly, chromosome: 1.
OZ210077.1:291921906-291921927
TACAAAGATAAATGGTTAAACAACGTGTGT291921906GTGTTGTGTGTTGTGTGTTTCGTGTGTGATGTACACCCGTAAGGGTATGAGA
Notothenia rossii genome assembly, chromosome: 2.
OX449112.1:4717811-4717832
GTGTGTGTGTTGTTTGTTGTGTTGTGTTTC4717811GTGTTGTGTGTTGTGTGTTTCGTGTTGTGTGTTGTGTCAGCGTTGACTCACC
Argentina silus genome assembly, chromosome: 20.
OX637387.1:13426253-13426274
CGCGCTGACATGCTGTAGATGCCCATGTTT13426253GTGTTGTGTGTTGTGTGTTTCGGTGTGTGTGTGCAATTGCGAGGGAGTTAGA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGAAACACACAACACACAACAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGAAACACACAACACACAACAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.788 | 0.779 | search_plus_done; http://172.18.8.135:50800/match?q=CGAAACACACAACACACAACAC&k=0&no_gap=0&offset=0&limit=50
1.792 | 1.004 | search_minus_done; http://172.18.8.135:50800/match?q=GTGTTGTGTGTTGTGTGTTTCG&k=0&no_gap=0&offset=0&limit=24
1.821 | 0.030 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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