GGGenome | Results

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2025-04-06 06:31:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

Ricordea florida genome assembly, chromosome: 8.
OX453279.1:25236220-25236239

ATTTTGTTAAGGCTTACATGATTCACTACC25236220CGAAATTCCTGTCCAAACTCGCACTAATGGCTATGTACCTATCAATGTTA

TSA: Cannabis sativa PK05336.1_1.CasaPuKu mRNA sequence.
JP449485.1:1013-1032

GGCGACGAGGTCGTCGGTTGTGAAGGATCG1013GAGTTTGGACAGGAATTTCGATCGGCAGGTTTCGTTGCCGAGGGTTTCTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.109 | 0.100 | search_plus_done; http://172.18.8.135:50400/match?q=CGAAATTCCTGTCCAAACTC&k=0&no_gap=0&offset=0&limit=50
0.143 | 0.034 | search_minus_done; http://172.18.8.135:50400/match?q=GAGTTTGGACAGGAATTTCG&k=0&no_gap=0&offset=0&limit=49
0.143 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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