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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:02:51, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Solanum melongena mRNA, clone: PER07J09, 3'end, expressed in pericarp at 10d after anthesis.
FS041601.1:69-88
CATATTAATACACATAAACGATCCGAAGGC69CGAACACATTCGCAAATCACAAAAAGGAAAATAAACTGATACACAGATAG
Solanum melongena mRNA, clone: PER07P16, 3'end, expressed in pericarp at 10d after anthesis.
FS041870.1:69-88
CATATTAATACACATAAACGATCCGAAGGC69CGAACACATTCGCAAATCACAAAAAGGAAAATAAACTGATACACAGATAG
Solanum melongena mRNA, clone: PER07J09, 5'end, expressed in pericarp at 10d after anthesis.
FS041600.1:411-430
CTATCTGTGTATCAGTTTATTTTCCTTTTT411GTGATTTGCGAATGTGTTCGGCCTTCGGATCGTTTATGTGTATTAATATG
Solanum melongena mRNA, clone: PLA04L15, 5'end, expressed in mixture of placenta and immature seed at 10d after anthesis.
FS045005.1:264-283
CTATCTGTGTATCAGTTTATTTTCCTTTTT264GTGATTTGCGAATGTGTTCGGCCTTCGGATCGTTTATGTGTATTAATATG
Solanum melongena mRNA, clone: SEP07B19, 5'end, expressed in sepal at 10d after anthesis.
FS062034.1:412-431
CTATCTGTGTATCAGTTTATTTTCCTTTTT412GTGATTTGCGAATGTGTTCGGCCTTCGGATCGTTTATGTGTATTAATATG
TSA: Megalopta genalis Contig5630.Mege mRNA sequence.
JI141651.1:37-56
TGTTTTTGATCATAATTATTGTTTGCCTCT37GTGATTTGCGAATGTGTTCGGAAAGCACGCCGACAAATAAAACTGCCGAC
Heligmosomoides polygyrus polygyrus genome assembly, chromosome: II.
OX377202.1:39268904-39268923
TTTCTCTGACGAGGGTGACGATGAAATGAT39268904GTGATTTGCGAATGTGTTCGCGAACAGAATACTTGCACAGCTTTACAACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGAACACATTCGCAAATCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGAACACATTCGCAAATCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.408 | 0.399 | search_plus_done; http://172.18.8.135:50400/match?q=CGAACACATTCGCAAATCAC&k=0&no_gap=0&offset=0&limit=50
0.732 | 0.325 | search_minus_done; http://172.18.8.135:50400/match?q=GTGATTTGCGAATGTGTTCG&k=0&no_gap=0&offset=0&limit=48
0.736 | 0.004 | cgi_end;

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