GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 07:27:55, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lepidonotus clava genome assembly, chromosome: 5.
OW387137.1:45608094-45608114
TAAACATCATTTGTCTAAAAGCAACGGAAG45608094CGACAGCAAAGAGATAGAGTGACAGAGTGTATGCCTGTAGGGTTTCCCAGA
VDDG12 Arbuscular mycorrhizae (AM)-colonized Pigoen pea under drought stress library Cajanus cajan cDNA, mRNA sequence.
JK087081.1:727-747
GAAGAAGTAGAGAGTGCCATTAGTGTGTTT727CACTCTATCTCTTTGCTGTCGCCACACCAAACCCTCAGCTGCCGAGGTTTT
TSA: Cajanus cajan cultivar UPAS 120 contig29969.UPAS mRNA sequence.
EZ647686.1:1275-1295
GAAGAAGTAGAGAGTGCCATTAGTGTGTTT1275CACTCTATCTCTTTGCTGTCGCCACACCAAACCCTCAGCTGCCGAGGTTTT
TSA: Cajanus cajan cultivar Asha contig01006.Asha mRNA sequence.
EZ648870.1:1342-1362
GAAGAAGTAGAGAGTGCCATTAGTGTGTTT1342CACTCTATCTCTTTGCTGTCGCCACCCCACACCAAACCCTCAGCCGCCGAG
Vaccinium vitis-idaea genome assembly, chromosome: 2.
OY978216.1:17306085-17306105
TAGTACAGAGCTCTCTCATACTCGGTCACA17306085CACTCTATCTCTTTGCTGTCGCTTATTTAAGACTCCATTAAAGCCTCTGTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGACAGCAAAGAGATAGAGTG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGACAGCAAAGAGATAGAGTG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.098 | 0.089 | search_plus_done; http://172.18.8.135:50400/match?q=CGACAGCAAAGAGATAGAGTG&k=0&no_gap=0&offset=0&limit=50
0.194 | 0.097 | search_minus_done; http://172.18.8.135:50400/match?q=CACTCTATCTCTTTGCTGTCG&k=0&no_gap=0&offset=0&limit=49
0.197 | 0.003 | cgi_end;

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