GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-11 07:47:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

JP 2001204477-A/1: UDP-D-Glucose: remonoid glucosyl transferase gene.
E49068.1:1562-1585
GCAAATGACAAGGTAGAATTGGTGGAGTCA1562CGACGGACACGTGTACAGTATTGATTGGAAGTTCTGACTCAAAGCACTTGTCGA
JP 2001204477-A/6: UDP-D-Glucose: remonoid glucosyl transferase gene.
E49073.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Sequence 136442 from Patent WO2008034648.
FB917169.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Sequence 137058 from Patent WO2008034648.
FB917785.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Sequence 136442 from Patent EP2090662.
HB787228.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Sequence 137058 from Patent EP2090662.
HB787844.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
UCRCS07_11D01_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11D01-G1-1-6.b, mRNA sequence.
CX043481.1:745-768
GCAAATGACAAGGTAGAATTGGTGGAGTCA745CGACGGACACGTGTACAGTATTGATTGGAAGTTCTGACTCAAAGCACTTGTCGA
CS00-C3-700-018-G12-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY693823.1:360-383
GCAAATGACAAGGTAGAATTGGTGGAGTCA360CGACGGACACGTGTACAGTATTGATTGGAAGTTCTGACTCAAAGCACTTGTCGA
CS00-C3-701-067-H11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY707374.1:668-691
GCAAATGACAAGGTAGAATTGGTGGAGTCA668CGACGGACACGTGTACAGTATTGATTGGAAGTTCTGACTCAAAGCACTTGTCGA
Citrus unshiu LGTase mRNA for limonoid UDP-glucosyltransferase, complete cds.
AB033758.1:1562-1585
GCAAATGACAAGGTAGAATTGGTGGAGTCA1562CGACGGACACGTGTACAGTATTGATTGGAAGTTCTGACTCAAAGCACTTGTCGA
Citrus maxima cultivar Liangpin You limonoid UDP-glucosyltransferase mRNA, complete cds.
EU304828.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Citrus limettioides limonoid UDP-glucosyltransferase (SLLGT) gene, complete cds.
EU531463.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Citrus x paradisi cultivar Marsh seedless limonoid UDP-glucosyltransferase (SLLGT) gene, complete cds.
EU531464.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Citrus sinensis cultivar Shahsavari limonoid UDP-glucosyltransferase (SLLGT) gene, complete cds.
EU531465.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Citrus aurantium limonoid UDP-glucosyltransferase (SLLGT) gene, complete cds.
EU531466.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Citrus sinensis cultivar Thompson navel limonoid UDP-glucosyltransferase (SLLGT) gene, complete cds.
EU531467.1:1507-1530
GCAAATGAGAAGGTAGAATTGGTGGAGTCA1507CGACGGACACGTGTACAGTATTGA
Citrus x paradisi cultivar Duncan putative limonoid UDP-glucosyltransferase mRNA, complete cds.
KM105844.1:1513-1536
GCAAATGACAAGGTAGAATTGGTGGAGTCA1513CGACGGACACGTGTACAGTATTGA
Citrus reticulata limonoid glucosyltransferase mRNA, complete cds.
KP306791.1:1510-1533
GCAAATGACAAGGTAGAATTGGTGGAGTCA1510CGACGGACACGTGTACAGTATTGA
JP 2001204477-A/8: UDP-D-Glucose: remonoid glucosyl transferase gene.
E49075.1:1-24
1TCAATACTGTACACGTGTCCGTCG
UCRCS01_04bf03_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_04bf03, mRNA sequence.
CB292369.1:144-167
TCGACAAGTGCTTTGAGTCAGAACTTCCAA144TCAATACTGTACACGTGTCCGTCGTGACTCCACCAATTCTACCTTGTCATTTGC
UCRCS06_0001A12_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001A12, mRNA sequence.
CN188911.1:163-186
TCGACAAGTGCTTTGAGTCAGAACTTCCAA163TCAATACTGTACACGTGTCCGTCGTGACTCCACCAATTCTACCTTGTCATTTGC
UCRCS06_0003K04_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0003K04, mRNA sequence.
CN190540.1:167-190
TCGACAAGTGCTTTGAGTCAGAACTTCCAA167TCAATACTGTACACGTGTCCGTCGTGACTCCACCAATTCTACCTTGTCATTTGC
UCRCS07_11D01_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11D01-G1-1-7.g, mRNA sequence.
CX043482.1:160-183
TCGACAAGTGCTTTGAGTCAGAACTTCCAA160TCAATACTGTACACGTGTCCGTCGTGACTCCACCAATTCTACCTTGTCATTTGC
UCRCS11_02D05_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002D05, mRNA sequence.
DN618166.1:181-204
TCGACAAGTGCTTTGAGTCAGAACTTCCAA181TCAATACTGTACACGTGTCCGTCGTGACTCCACCAATTCTACCTTGTCATTTGC
UCRCS11_02P01_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0002P01, mRNA sequence.
DN618712.1:175-198
TCGACAAGTGCTTTGAGTCAAAACTTCCAA175TCAATACTGTACACGTGTCCGTCGGGACTCCCCCAATTCTACCTTGTCATTTGC
UCRCS11_03C15_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003C15, mRNA sequence.
DN618879.1:182-205
TCGACAAGTGCTTTGAGTCAGAACTTCCAA182TCAATACTGTACACGTGTCCGTCGTGACTCCACCAATTCTACCTTGTCATTTGC
UCRCS11_03E22_r Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003E22, mRNA sequence.
DN618988.1:172-195
TCGACAAGTGCTTTGAGTCAGAACTTCCAA172TCAATACTGTACACGTGTCCGTCGTGACTCCACCAATTCTACCTTGTCATTTGC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGACGGACACGTGTACAGTATTGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGACGGACACGTGTACAGTATTGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.345 | 0.336 | search_plus_done; http://172.18.8.135:50400/match?q=CGACGGACACGTGTACAGTATTGA&k=0&no_gap=0&offset=0&limit=50
0.684 | 0.340 | search_minus_done; http://172.18.8.135:50400/match?q=TCAATACTGTACACGTGTCCGTCG&k=0&no_gap=0&offset=0&limit=32
0.690 | 0.006 | cgi_end;

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