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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-03-14 18:37:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Brassica oleracea var. alboglabra EST, clone AAFC_WHRI_BoE01a013K15_SP6.
AM059974.1:178-197
AAACAGTTTCTCACCAGAATCCGAAAATGT178CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
10FGYSUA_UP_005_H12_16OCT2003_082 Brassica seedling 10FGYSUA Brassica napus cDNA 5', mRNA sequence.
CN729117.1:201-220
AAACAGTTTCTCACCAGAATCCGAAAATGT201CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
41-E019394-021-011-A12-T7R ADIS-MPIZ 021 Brassica napus cDNA clone MPIZp1022A1211Q, mRNA sequence.
CX192594.1:176-195
AAACAGTTTCTCACCAGAATCCGAAAATGT176CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
Brassica oleracea var. viridis mRNA, clone: KALE-052G19, 5' end sequence.
DK475582.1:248-267
AAACAGTTTCTCACCAGAATCCGAAAATGT248CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
48RDOAM_UP_018_F12_14AUG2004_086 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY014963.1:187-206
AAACAGTTTCTCACCAGAATCCGAAAATGT187CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
48RDOAM_UP_050_H06_16SEP2004_034 O. Alba 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
DY020024.1:204-223
AAACAGTTTCTCACCAGAATCCGAAAATGT204CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
22FGYLU_UP_004_A12_30JAN2004_096 Brassica napus 22FGYLU Brassica napus cDNA 5', mRNA sequence.
DY028650.1:197-216
AAACAGTTTCTCACCAGAATCCGAAAATGT197CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
BNYS6DCT_UP_021_C09_05MAY2005_075 Brassica napus seeds BNYS6DCT Brassica napus cDNA 5', mRNA sequence.
EE479695.1:204-223
AAACAGTTTCTCACCAGAATCCGAAAATGT204CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
BMSA01-T7-22-A01 Brassica napus Full-length cDNA Library Brassica napus cDNA, mRNA sequence.
EG021240.1:198-217
AAACAGTTTCTCACCAGAATCCGAAAATGT198CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
65JKBNM0_T3_039_B08_19MAR2005_062 65JKBNM0 Brassica napus cDNA 5', mRNA sequence.
EL589952.1:175-194
AAACAGTTTCTCACCAGAATCCGAAAATGT175CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
65JKBNM0_T3_040_H08_19MAR2005_050 65JKBNM0 Brassica napus cDNA 5', mRNA sequence.
EL590108.1:174-193
AAACAGTTTCTCACCAGAATCCGAAAATGT174CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
EST2997 3-9 DAP Brassica Napus seed cDNA library Brassica napus cDNA clone B127C071, mRNA sequence.
EL625491.1:250-269
AAACAGTTTCTCACCAGAATCCGAAAATGT250CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
24RDBNH_UP_143_H11_13DEC2006_081 Brassica napus 24RDBNH Brassica napus cDNA 5', mRNA sequence.
ES919407.1:204-223
AAACAGTTTCTCACCAGAATCCGAAAATGT204CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
46RDOAG_UP_057_G03_01FEB2006_019 Brassica oleracea 46RDOAG Brassica oleracea cDNA 5', mRNA sequence.
ES937979.1:75-94
AAACGGTTTCTCACCAGAATCCGAAAATGT75CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
48RDOAM_UP_071_E07_03FEB2006_055 Brassica oleracea 48RDOAM Brassica oleracea cDNA 5', mRNA sequence.
ES944616.1:189-208
AAACAGTTTCTCACCAGAATCCGAAAATGT189CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
BNAEN3GH_UP_077_D01_14SEPT2006_009 Brassica napus BNAEN3GH Brassica napus cDNA 5', mRNA sequence.
ES998142.1:188-207
AAACAGTTTCTCACCAGAATCCGAAAATGT188CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
0121773 Brassica napus Root library Brassica napus cDNA, mRNA sequence.
EV116461.1:231-250
AAACAGTTTCTCACCAGAATCCGAAAATGT231CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
0128952 Brassica napus Root library Brassica napus cDNA, mRNA sequence.
EV123640.1:217-236
AAACAGTTTCTCACCAGAATCCGAAAATGT217CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
0131921 Brassica napus Root library Brassica napus cDNA, mRNA sequence.
EV126609.1:213-232
AAACAGTTTCTCACCAGAATCCGAAAATGT213CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
0090450 Brassica napus Cold acclimation - dark Brassica napus cDNA, mRNA sequence.
EV192967.1:133-152
AAACAGTTTCTCACCAGAATCCGAAAATGG133CGACTTTGAACCCGTTTGATCTCTTGGGAGGAGACGCTGAGGATCCAAGC
0134359 Brassica napus Root - drought Brassica napus cDNA, mRNA sequence.
EV219251.1:199-218
AAACAGTTTCTCACCAGAATCCGAAAATGT199CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
BR003928 light-chilled whole plant cDNA library KBCD Brassica rapa subsp. pekinensis cDNA clone KBCD-027A08 5', mRNA sequence.
EX019284.1:165-184
AAACAGTTTCTCACCAGAATCCGAAAATGT165CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR004537 light-chilled whole plant cDNA library KBCD Brassica rapa subsp. pekinensis cDNA clone KBCD-034C12 5', mRNA sequence.
EX019893.1:165-184
AAACAGTTTCTCACCAGAATCCGAAAATGT165CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR006094 light-chilled whole plant cDNA library KBCD Brassica rapa subsp. pekinensis cDNA clone KBCD-057D12 5', mRNA sequence.
EX021450.1:105-124
AAACAGTTTCTCACCAGAATCCGAAAATGT105CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR021553 floral bud cDNA library KBFL Brassica rapa subsp. pekinensis cDNA clone KBFL-017A03 5', mRNA sequence.
EX036909.1:160-179
AAACAGTTTCTCACCAGAATCCGAAAATGT160CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR032512 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-023F02 5', mRNA sequence.
EX047868.1:172-191
AAACAGTTTCTCACCAGAATCCGAAAATGT172CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR033420 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-037G07 5', mRNA sequence.
EX048776.1:172-191
AAACAGTTTCTCACCAGAATCCGAAAATGT172CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR033431 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-037H07 5', mRNA sequence.
EX048787.1:172-191
AAACAGTTTCTCACCAGAATCCGAAAATGT172CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR033940 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-044H05 5', mRNA sequence.
EX049296.1:172-191
AAACAGTTTCTCACCAGAATCCGAAAATGT172CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR036668 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-101B04 5', mRNA sequence.
EX052024.1:165-184
AAACAGTTTCTCACCAGAATCCGAAAATGT165CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR037917 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-122E03 5', mRNA sequence.
EX053273.1:172-191
AAACAGTTTCTCACCAGAATCCGAAAATGT172CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR039281 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-139C01 5', mRNA sequence.
EX054637.1:168-187
AAACAGTTTCTCACCAGAATCCGAAAATGT168CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR039303 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-139E08 5', mRNA sequence.
EX054659.1:162-181
AAACAGTTTCTCACCAGAATCCGAAAATGT162CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR039431 floral buds cDNA library KBFS Brassica rapa subsp. pekinensis cDNA clone KBFS-141C08 5', mRNA sequence.
EX054787.1:164-183
AAACAGTTTCTCACCAGAATCCGAAAATGT164CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR063367 silique cDNA library KBSP Brassica rapa subsp. pekinensis cDNA clone KBSP-022F06 5', mRNA sequence.
EX078723.1:173-192
AAACAGTTTCTCACCAGAATCCGAAAATGT173CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR063909 silique cDNA library KBSP Brassica rapa subsp. pekinensis cDNA clone KBSP-029C01 5', mRNA sequence.
EX079265.1:105-124
AAACAGTTTCTCACCAGAATCCGAAAATGT105CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGA
BR081876 infected leaf cDNA library KFPC Brassica rapa subsp. pekinensis cDNA clone KFPC-019C09 5', mRNA sequence.
EX095586.1:188-207
AAACAGTTTCTCACCAGAATCCGAAAATGT188CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR092741 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-001F05 5', mRNA sequence.
EX106451.1:198-217
AAACAGTTTCTCACCAGAATCCGAAAATGT198CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR095447 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-041G11 5', mRNA sequence.
EX109157.1:198-217
AAACAGTTTCTCACCAGAATCCGAAAATGT198CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR095663 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-045F08 5', mRNA sequence.
EX109373.1:198-217
AAACAGTTTCTCACCAGAATCCGAAAATGT198CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
BR096198 whole plant cDNA library KFYP Brassica rapa subsp. pekinensis cDNA clone KFYP-053G05 5', mRNA sequence.
EX109908.1:198-217
AAACAGTTTCTCACCAGAATCCGAAAATGT198CGACTTTGAACCCGTTTGATCTCTTGGGAGGCGACGCCGAGGATCCAAGC
BR112221 ovule and silique cDNA library KHOS Brassica rapa subsp. pekinensis cDNA clone KHOS-06C01 3', mRNA sequence.
EX128391.1:165-184
AAACAGTTTCTCACCAGAATCCGAAAATGT165CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
RR4C293TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EX771423.1:209-228
GATTCGATTTCACCCAGAATCCGAAAATGT209CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
RS3CD88TF RS3(RT) Raphanus sativus cDNA 5', mRNA sequence.
EX904907.1:216-235
TATTCGATTTCACCAGAATCCCAAAAATGT216CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
Raphanus sativus mRNA, clone: RSCS01C10, 5' end sequence.
FY446254.1:169-188
TCTCGTGGTCGATTCAGAATCCGAAAATGT169CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
BNAOV1GH_T3_061_C12_14SEPT2007_092 BNAOV1GH Brassica napus cDNA 5', mRNA sequence.
GR446961.1:177-196
AAACAGTTTCTCACCAGAATCCGAAAATGT177CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
0248265 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO919041.1:234-253
AAACAGTTTCTCACCAGAATCCGAAAATGT234CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
0263750 B. juncea infected with A. candida 2VRR Brassica juncea/Albugo candida mixed genomic library cDNA, mRNA sequence.
HO935474.1:230-249
AAACAGTTTCTCACCAGAATCCGAAAATGT230CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
TSA: Raphanus sativus var. sativus RNA, contig: WG3_173.
FX660539.1:258-277
TCTCGTGGTCGATTCAGAATCCGAAAATGT258CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
TSA: Brassica rapa subsp. pekinensis RNA, contig: CF3_219.
FX702818.1:83-102
AAACAGTTTCTCACCAGAATCCGAAAATGT83CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCCGAGGATCCAAGC
Raphanus sativus DNA, clone: RSDH24N02_RP-2.
GA885140.1:268-287
TCTCGTGGTCGATTCAGAATCCGAAAATGT268CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
Brassica nigra cultivar No100 clone BAC BGH184O10, *** SEQUENCING IN PROGRESS ***, 2 unordered pieces.
KC796003.1:37129-37148
GTTTCGATTTTCACCAGAATCCGAAAATGT37129CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
Brassica oleracea Contig A, complete sequence.
AC183495.1:205381-205400
AAACAGTTTCTCACCAGAATCCGAAAATGT205381CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
Brassica napus cultivar Xiang5A chromosome 9.
CP123884.1:14052121-14052140
AAACAGTTTCTCACCAGAATCCGAAAATGT14052121CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:17822756-17822775
TCTCGTGGTCGATTCAGAATCCGAAAATGT17822756CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:17822756-17822775
TCTCGTGGTCGATTCAGAATCCGAAAATGT17822756CGACTTTGAACCCGTTTGATCTCTTGGGAGGTGACGCTGAGGATCCAAGC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGACTTTGAACCCGTTTGAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGACTTTGAACCCGTTTGAT | format : html | download : | debug :

0.009 | 0.009 | search_start;
2.843 | 2.834 | search_plus_done; http://172.18.8.135:50400/match?q=CGACTTTGAACCCGTTTGAT&k=0&no_gap=0&offset=0&limit=50
3.005 | 0.162 | search_minus_done; http://172.18.8.135:50400/match?q=ATCAAACGGGTTCAAAGTCG&k=0&no_gap=0&offset=0&limit=0
3.005 | 0.000 | cgi_end;

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