GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 04:46:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Harpalus rubripes genome assembly, chromosome: 4.
OY720451.1:27813231-27813250
ATGAAGTGCAATGCAGTGTTAGCATGGGGA27813231CGAGACTCATATATCAAAGCTTTGTGAAGTCGCCGATACTGAGCTTGTAT
RTWW3_12_H12.b1_A022 Well-watered loblolly pine roots WW3 Pinus taeda cDNA clone RTWW3_12_H12_A022 3', mRNA sequence.
CF479743.1:450-469
CTTGCCACAAGAAGGGGTGAAGAAATTCCT450GCTTTGATATATGAGTCTCGACCTGCAGTCCATGCAAATGCAACATGGGA
GQ03506.B7_L09 GQ035 - Needles - End of season Picea glauca cDNA clone GQ03506_L09 5', mRNA sequence.
EX403069.1:130-149
CTTGCCACAAGAAGGGGCGAAGAACTTCCT130GCTTTGATATATGAGTCTCGACCTGCAGTCCATGCCAATGCTCCATATCT
Picea glauca clone GQ03506_L09 mRNA sequence.
BT114029.1:130-149
CTTGCCACAAGAAGGGGCGAAGAACTTCCT130GCTTTGATATATGAGTCTCGACCTGCAGTCCATGCCAATGCTCCATATCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGAGACTCATATATCAAAGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGAGACTCATATATCAAAGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.107 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CGAGACTCATATATCAAAGC&k=0&no_gap=0&offset=0&limit=50
0.213 | 0.105 | search_minus_done; http://172.18.8.135:50400/match?q=GCTTTGATATATGAGTCTCG&k=0&no_gap=0&offset=0&limit=49
0.215 | 0.002 | cgi_end;

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