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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:12:45, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
HG994375.1:77886638-77886658
GATCGGACAGAGCTTCTTACAAGGGGAAAA77886638CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR722617.1:93518431-93518451
GATCGGACAGAGCTTCTTACAAGGGGAAAA93518431CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR812262.1:97639908-97639928
GATCGGACAGAGCTTCTTACAAGGGGAAAA97639908CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR812971.1:93518431-93518451
GATCGGACAGAGCTTCTTACAAGGGGAAAA93518431CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR824633.1:92961808-92961828
GATCGGACAGAGCTTCTTACAAGGGGAAAA92961808CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828088.1:92496735-92496755
GATCGGACAGAGCTTCTTACAAGGGGAAAA92496735CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828095.1:90802258-90802278
GATCGGACAGAGCTTCTTACAAGGGGAAAA90802258CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828102.2:96747116-96747136
GATCGGACAGAGCTTCTTACAAGGGGAAAA96747116CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828116.1:90593014-90593034
GATCGGACAGAGCTTCTTACAAGGGGAAAA90593014CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828140.1:99497156-99497176
GATCGGACAGAGCTTCTTACAAGGGGAAAA99497156CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828147.2:92396929-92396949
GATCGGACAGAGCTTCTTACAAGGGGAAAA92396929CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828154.1:83847624-83847644
GATCGGACAGAGCTTCTTACAAGGGGAAAA83847624CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828161.1:95646085-95646105
GATCGGACAGAGCTTCTTACAAGGGGAAAA95646085CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828168.1:92364827-92364847
GATCGGACAGAGCTTCTTACAAGGGGAAAA92364827CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828175.1:93573550-93573570
GATCGGACAGAGCTTCTTACAAGGGGAAAA93573550CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828189.1:95029627-95029647
GATCGGACAGAGCTTCTTACAAGGGGAAAA95029627CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR828274.1:98748193-98748213
GATCGGACAGAGCTTCTTACAAGGGGAAAA98748193CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR865396.1:89992674-89992694
GATCGGACAGAGCTTCTTACAAGGGGAAAA89992674CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
LR890097.1:93790809-93790829
GATCGGACAGAGCTTCTTACAAGGGGAAAA93790809CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OU015682.1:92055667-92055687
GATCGGACAGAGCTTCTTACAAGGGGAAAA92055667CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OU701464.1:80679880-80679900
GATCGGACAGAGCTTCTTACAAGGGGAAAA80679880CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459903.1:92101837-92101857
GATCGGACAGAGCTTCTTACAAGGGGAAAA92101837CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX459910.1:93930980-93931000
GATCGGACAGAGCTTCTTACAAGGGGAAAA93930980CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX459917.1:93787102-93787122
GATCGGACAGAGCTTCTTACAAGGGGAAAA93787102CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX459931.1:93989574-93989594
GATCGGACAGAGCTTCTTACAAGGGGAAAA93989574CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX459971.1:95292612-95292632
GATCGGACAGAGCTTCTTACAAGGGGAAAA95292612CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459978.1:92872914-92872934
GATCGGACAGAGCTTCTTACAAGGGGAAAA92872914CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX459985.1:94016893-94016913
GATCGGACAGAGCTTCTTACAAGGGGAAAA94016893CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX459999.1:93677989-93678009
GATCGGACAGAGCTTCTTACAAGGGGAAAA93677989CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460013.1:91663869-91663889
GATCGGACAGAGCTTCTTACAAGGGGAAAA91663869CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX460034.1:94065440-94065460
GATCGGACAGAGCTTCTTACAAGGGGAAAA94065440CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460055.1:96867213-96867233
GATCGGACAGAGCTTCTTACAAGGGGAAAA96867213CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460061.1:93948914-93948934
GATCGGACAGAGCTTCTTACAAGGGGAAAA93948914CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460076.1:94499065-94499085
GATCGGACAGAGCTTCTTACAAGGGGAAAA94499065CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX460090.1:98445834-98445854
GATCGGACAGAGCTTCTTACAAGGGGAAAA98445834CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460101.1:93417969-93417989
GATCGGACAGAGCTTCTTACAAGGGGAAAA93417969CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460104.1:96617726-96617746
GATCGGACAGAGCTTCTTACAAGGGGAAAA96617726CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460111.1:94581766-94581786
GATCGGACAGAGCTTCTTACAAGGGGAAAA94581766CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460118.1:92792945-92792965
GATCGGACAGAGCTTCTTACAAGGGGAAAA92792945CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460125.1:95768790-95768810
GATCGGACAGAGCTTCTGACAAGGGGAAAA95768790CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460132.1:91443243-91443263
GATCGGACAGAGCTTCTTACAAGGGGAAAA91443243CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTATAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460139.1:96771838-96771858
GATCGGACAGAGCTTCTTACAAGGGGAAAA96771838CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460146.1:94049434-94049454
GATCGGACAGAGCTTCTTACAAGGGGAAAA94049434CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460153.1:92451283-92451303
GATCGGACAGAGCTTCTTACAAGGGGAAAA92451283CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460160.1:91626216-91626236
GATCGGACAGAGCTTCTTACAAGGGGAAAA91626216CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460167.1:91914972-91914992
GATCGGACAGAGCTTCTTACAAGGGGAAAA91914972CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460174.1:92729848-92729868
GATCGGACAGAGCTTCTTACAAGGGGAAAA92729848CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460181.1:94427293-94427313
GATCGGACAGAGCTTCTTACAAGGGGAAAA94427293CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460188.1:95298376-95298396
GATCGGACAGAGCTTCTTACAAGGGGAAAA95298376CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460195.1:94552935-94552955
GATCGGACAGAGCTTCTTACAAGGGGAAAA94552935CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460202.1:94410869-94410889
GATCGGACAGAGCTTCTTACAAGGGGAAAA94410869CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460209.1:93920588-93920608
GATCGGACAGAGCTTCTTACAAGGGGAAAA93920588CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460216.1:93286815-93286835
GATCGGACAGAGCTTCTTACAAGGGGAAAA93286815CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460223.1:95778815-95778835
GATCGGACAGAGCTTCTTACAAGGGGAAAA95778815CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460230.1:95587673-95587693
GATCGGACAGAGCTTCTTACAAGGGGAAAA95587673CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460244.1:95237560-95237580
GATCGGACAGAGCTTCTTACAAGGGGAAAA95237560CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460251.1:97356863-97356883
GATCGGACAGAGCTTCTTACAAGGGGAAAA97356863CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460258.1:94449753-94449773
GATCGGACAGAGCTTCTTACAAGGGGAAAA94449753CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460265.1:92121459-92121479
GATCGGACAGAGCTTCTTACAAGGGGAAAA92121459CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460272.1:95708489-95708509
GATCGGACAGAGCTTCTTACAAGGGGAAAA95708489CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460279.1:93093784-93093804
GATCGGACAGAGCTTCTTACAAGGGGAAAA93093784CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460286.1:92298988-92299008
GATCGGACAGAGCTTCTTACAAGGGGAAAA92298988CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460293.1:92015135-92015155
GATCGGACAGAGCTTCTTACAAGGGGAAAA92015135CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460300.1:92938285-92938305
GATCGGACAGAGCTTCTTACAAGGGGAAAA92938285CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX460307.1:92098585-92098605
GATCGGACAGAGCTTCTTACAAGGGGAAAA92098585CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590735.1:92950383-92950403
GATCGGACAGAGCTTCTTACAAGGGGAAAA92950383CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX590742.1:93680990-93681010
GATCGGACAGAGCTTCTTACAAGGGGAAAA93680990CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare f. agriocrithon genome assembly, chromosome: 2H.
OX590756.1:88632937-88632957
GATCGGACAGAGCTTCTTACAAGGGGAAAA88632937CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638743.1:92364887-92364907
GATCGGACAGAGCTTCTTACAAGGGGAAAA92364887CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638750.1:97022440-97022460
GATCGGACAGAGCTTCTTACAAGGGGAAAA97022440CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638757.1:93041209-93041229
GATCGGACAGAGCTTCTTACAAGGGGAAAA93041209CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638785.1:93435165-93435185
GATCGGACAGAGCTTCTTACAAGGGGAAAA93435165CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. vulgare genome assembly, chromosome: 2H.
OX638792.1:94022296-94022316
GATCGGACAGAGCTTCTTACAAGGGGAAAA94022296CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638799.1:94667419-94667439
GATCGGACAGAGCTTCTTACAAGGGGAAAA94667419CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638806.1:93745545-93745565
GATCGGACAGAGCTTCTTACAAGGGGAAAA93745545CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638813.1:92125449-92125469
GATCGGACAGAGCTTCTTACAAGGGGAAAA92125449CGAGGCACACAGGAGATGCAGGGCAGTGTCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare genome assembly, chromosome: 2H.
OX638820.1:93430845-93430865
GATCGGACAGAGCTTCTTACAAGGGGAAAA93430845CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 2H.
OX638876.1:95940754-95940774
GATCGGACAGAGCTTCTTACAAGGGGAAAA95940754CGAGGCACACAGGAGATGCAGGGCAGTGCCGATGCGATGAAGGGTCTCTAG
Dicrocoelium dendriticum genome assembly, chromosome: 2.
OX104064.1:95534508-95534528
GGTTTGGCCCTTACTTAGCAATTTATTCAG95534508CGAGGCACACAGGAGATGCAGTTGGGGTAGAAAGCCGTTTTAATGACGGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGAGGCACACAGGAGATGCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGAGGCACACAGGAGATGCAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.377 | 0.369 | search_plus_done; http://172.18.8.135:50400/match?q=CGAGGCACACAGGAGATGCAG&k=0&no_gap=0&offset=0&limit=50
0.529 | 0.152 | search_minus_done; http://172.18.8.135:50400/match?q=CTGCATCTCCTGTGTGCCTCG&k=0&no_gap=0&offset=0&limit=0
0.529 | 0.000 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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