GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-06 07:36:19, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Taurulus bubalis genome assembly, chromosome: 19.
OU342729.1:18740965-18740984
CGAGAGGAAACGAGATGAAACGAAAGTAAA18740965CGAGTGGAAAGAGAGGAACGAGATGAAACAAGATGAAACGAGAGGAAACG
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33574648-33574667
TCTGTGTTCTTCAGTTCCTCTCTTTCCTCT33574648CGTTCCTCTCTTTCCACTCGTTCCTCTCTTTCCTCTTGTTCCTCTCTTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33575305-33575324
TCTCGTTCCTCTCTTTCCTCTCTTTCCTCT33575305CGTTCCTCTCTTTCCACTCGTTCCTCACGTTCCTCTCGTTCCTCTCTTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33575782-33575801
TCTCGTTCCTCTCTTTCCTCTCTTTCCTCT33575782CGTTCCTCTCTTTCCACTCGTTCCTCACGTTCCTCTCGTTCCTCTCTTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33576025-33576044
TCTCGTTCCTCTCGTTCCTCTCTTTCCTCT33576025CGTTCCTCTCTTTCCACTCGTTCCTCTCTTTCCTCATGTTCCTCTCGTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33576295-33576314
TCTCGTTCCTCTCGTTCCTCTCTTTCCTCT33576295CGTTCCTCTCTTTCCACTCGTTCCTCTCTTTCCTCATGTTCCTCTCGTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33577213-33577232
TCTCGTTCCTCACGTTCCTCTCTTTCCTCT33577213CGTTCCTCTCTTTCCACTCGTTCCTCACGTTCCTCTCGTTCCTCTCTTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33577330-33577349
TCTCGTTCCTCTCGTTCCTCTCTTTCCTCT33577330CGTTCCTCTCTTTCCACTCGTTCCTCTCTTTCCTCATGTTCCTCTCGTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33577987-33578006
TCACGTTCCTCTAGTTCCTCTCTTTCCTCT33577987CGTTCCTCTCTTTCCACTCGTTCCTCTCTTTCCTCTTGTTCCTCTCTTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33578176-33578195
TCTCGTTCCTCTCGTTCCTCTCTTTCCTCT33578176CGTTCCTCTCTTTCCACTCGTTCCTCTCTTTCCTCATGTTCCTCTCGTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33578617-33578636
TCTCGTTCCTCTCTTTCCTCTCGTTCCTCT33578617CGTTCCTCTCTTTCCACTCGTTCCTCTCTTTCCTCTCTTTCCACTCGTTC
Squalius cephalus genome assembly, chromosome: 22.
OX439268.1:33578806-33578825
ACTCGTTCCTCTCTTTCCTCATGTTCCTCT33578806CGTTCCTCTCTTTCCACTCGTTCCTCTCTATCCTCATGTTCCTCTCTTTC
Porphyra yezoensis cDNA, clone:PFL037a10_r, 5'end.
AU192871.1:200-219
TGTGTGTGTGTGTGCGGTTGTGTCCATGTG200CGTTCCTCTCTTTCCACTCGATTTTGCAGTACCCGGGCCGGTGGGGTCTC
Porphyra yezoensis cDNA, clone:PFL051h12_r, 5'end.
AU193867.1:237-256
TGTGTGTGTGTGTGCGGTTGTGTCCATGTG237CGTTCCTCTCTTTCCACTCGATTTTGCAGTACCCGGGCCGGTGGGGTCTC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGAGTGGAAAGAGAGGAACG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGAGTGGAAAGAGAGGAACG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.102 | 0.093 | search_plus_done; http://172.18.8.135:50400/match?q=CGAGTGGAAAGAGAGGAACG&k=0&no_gap=0&offset=0&limit=50
0.190 | 0.088 | search_minus_done; http://172.18.8.135:50400/match?q=CGTTCCTCTCTTTCCACTCG&k=0&no_gap=0&offset=0&limit=49
0.198 | 0.008 | cgi_end;

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