GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-28 07:57:34, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

MTGland-A070_2007-08-17/MTGland-70_K16_027_1 Medicago truncatula A17 glandular trichome Medicago truncatula cDNA, mRNA sequence.
EX526169.1:14-33
ACGGCCGGGGGCT14CGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGAC
TSA: Medicago sativa subsp. falcata cultivar Wisfal FZ0_12383 mRNA sequence.
JL893558.1:190-209
TTGAGCACACACCATGATTTGCGATTGGCT190CGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGAC
MBEFK72TR mth2 Medicago truncatula genomic clone 44L23, genomic survey sequence.
CG920555.1:558-577
TTGAGCACACACAATGATTTGCGATTGGCT558CGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGAC
MBEIO11TF mth2 Medicago truncatula genomic clone 63B21, genomic survey sequence.
CG960390.1:600-619
TTGAGCACACACAATGATTTGCGATTGGCT600CGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGAGCTGAC
mth2-150F18RM1 BAC end, cultivar Jemalong A17 of Medicago truncatula.
CR483533.1:600-619
TTGAGCACACACAATGATTTGCGATTGGCT600CGAGTGGTGCTGTTTGCCGCTGACAACATACCCCCTTTACAGGGAGCTGA
Medicago truncatula strain A17 clone mth2-67b7, *** SEQUENCING IN PROGRESS ***, 2 ordered pieces.
AC155894.6:115070-115089
TGTGTTACCTGTAAAGGGGGTATGTTGTCA115070GCGGCAAACAGCACCACTCGAGCCAATCGCAAATCATGGTGTGTGCTCAA
Medicago truncatula clone mth2-130l15, WORKING DRAFT SEQUENCE, 60 unordered pieces.
AC229691.8:137633-137652
TGTGTTACCTGTAAAGGGGGTATGTTGTCA137633GCGGCAAACAGCACCACTCGAGCCAATCGCAAATCATGGTGTGTGCTCAA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGAGTGGTGCTGTTTGCCGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGAGTGGTGCTGTTTGCCGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.187 | 0.179 | search_plus_done; http://172.18.8.135:50400/match?q=CGAGTGGTGCTGTTTGCCGC&k=0&no_gap=0&offset=0&limit=50
0.206 | 0.019 | search_minus_done; http://172.18.8.135:50400/match?q=GCGGCAAACAGCACCACTCG&k=0&no_gap=0&offset=0&limit=45
0.208 | 0.001 | cgi_end;

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