GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:07:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392552.1:55827539-55827559
TAAAAACCAAACTTCAATCAAGATTTACGT55827539CGAGTTCAAATCAAGAATGGCAAAGAAATTCACGTGGAGTTCAAAAATTTT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 6.
OX392561.1:56997741-56997761
TAAAAACCAAACTTCAATCAAGATTTACGT56997741CGAGTTCAAATCAAGAATGGCAAAGAAATTCACGTGGAGTTCAAAAATTTT
E012389-024-012-E14-SP6 MPIZ-ADIS-024-leaf Beta vulgaris cDNA clone 024-012-E14 5-PRIME, mRNA sequence.
BQ586664.1:215-235
AAAATTTTTGAACTCCACTTTAATTTCTTT215GCCATTCTTGATTTGAACTCGACGTAAATGGGGACCGAAGTTTGGTTTTTA
TSA: Beta vulgaris Locus_4108_Transcript_1/5_Confidence_0.200_Length_339 mRNA sequence.
JP493901.1:32-52
AAAATTTTTGAACTCCACGTGAATTTCTTT32GCCATTCTTGATTTGAACTCGACGTAAATCTTGATTGAAGTTTGGTTTTTA
TSA: Beta vulgaris Locus_4108_Transcript_4/5_Confidence_0.733_Length_2086 mRNA sequence.
JP493904.1:32-52
AAAATTTTTGAACTCCACGTGAATTTCTTT32GCCATTCTTGATTTGAACTCGACGTAAATCTTGATTGAAGTTTGGTTTTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGAGTTCAAATCAAGAATGGC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGAGTTCAAATCAAGAATGGC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.140 | 0.131 | search_plus_done; http://172.18.8.135:50400/match?q=CGAGTTCAAATCAAGAATGGC&k=0&no_gap=0&offset=0&limit=50
0.225 | 0.084 | search_minus_done; http://172.18.8.135:50400/match?q=GCCATTCTTGATTTGAACTCG&k=0&no_gap=0&offset=0&limit=48
0.227 | 0.002 | cgi_end;

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