GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 11:38:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Arachis hypogaea DNA, clone: AHGS47F03.
DH961690.1:321-340
GTGTGTGTGTGTGTGTGTGCGCGCGCTCTA321CGATAGACTCGTCGTTGCAACGTCTTTGCCAGTCGTCATCACTGTGAGCC
Arachis hypogaea cultivar Shitouqi chromosome B04.
CP030996.1:25647762-25647781
GTGTGTGTGTGTGTGTGTGCGCGCGCTCTA25647762CGATAGACTCGTCGTTGCAACGTCTTTGCCAGTCGTCATCACTGTGAGCC
Arachis ipaensis cultivar K30076 chromosome 04.
CP049895.1:24812739-24812758
GTGTGTGTGTGTGTGTGTGCGCGCGCTCTA24812739CGATAGACTCGTCGTTGCAACGTCTTTGCCAGTCGTCATCACTGTGAGCC
Arachis hypogaea DNA, clone: SAAC10P12.
DH966563.1:743-762
GGCTCACAGTGATGACGACTGGCAAAGACG743TTGCAACGACGAGTCTATCGTAGAGCGCGCGCACACACACACACACACAC
IPAHM0586 Microsatellite enriched genomic DNA library of groundnut Arachis hypogaea genomic clone IPAHM0586, genomic survey sequence.
ER974565.1:310-329
GGCTCACAGTGATGACGACTGGCAAAGACG310TTGCAACGACGAGTCTATCGTAGAGCGCGCGCACACACACACACACACAC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGATAGACTCGTCGTTGCAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATAGACTCGTCGTTGCAA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.139 | 0.130 | search_plus_done; http://172.18.8.135:50400/match?q=CGATAGACTCGTCGTTGCAA&k=0&no_gap=0&offset=0&limit=50
0.225 | 0.086 | search_minus_done; http://172.18.8.135:50400/match?q=TTGCAACGACGAGTCTATCG&k=0&no_gap=0&offset=0&limit=47
0.226 | 0.001 | cgi_end;

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