GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 02:50:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

EG-A11_001_A07 Oil palm abnormal apex Lambda Zap Library Elaeis guineensis cDNA, mRNA sequence.
CN599688.1:160-179
ACCCTCTCCGCCGCCCCCCGCCTCGCTGCC160CGATCCCTTTGCTTCAAGTCCAGCCTCAGATCAGATGGGACCGCTGCCTT
Elaeis guineensis EST, clone (6lib)_isotig45679.
LM641813.1:74-93
ACCCTCTCCGCCGCCCCCCGCCTCGCTGCC74CGATCCCTTTGCTTCAAGTCCAGCCTCAGATCGGATGGGACCGCTGCCTT
Elaeis guineensis EST, clone (6lib)_isotig03028.
LM621907.1:1198-1217
AAGGCAGCGGTCCCATCCGATCTGAGGCTG1198GACTTGAAGCAAAGGGATCGGGCAGCGAGGCGGGGGGCGGCGGAGAGGGT
Tridacna gigas genome assembly, chromosome: 1.
OX244028.2:31899475-31899494
AGCCCAAATATCTCAGTCCTTAACGTAAGG31899475GACTTGAAGCAAAGGGATCGCTGGTTCCAATCCCCACCTCGCCTATTTCT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGATCCCTTTGCTTCAAGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATCCCTTTGCTTCAAGTC | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.273 | 0.264 | search_plus_done; http://172.18.8.135:50400/match?q=CGATCCCTTTGCTTCAAGTC&k=0&no_gap=0&offset=0&limit=50
0.427 | 0.154 | search_minus_done; http://172.18.8.135:50400/match?q=GACTTGAAGCAAAGGGATCG&k=0&no_gap=0&offset=0&limit=48
0.428 | 0.001 | cgi_end;

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