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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
双方向を検索 +方向のみ検索 -方向のみ検索

2025-04-03 11:33:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます(ミスマッチ挿入欠失

Dur25.root.ADAA-aaf15f05.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence.
GW932413.1:247-266
ATTTCTAATCATAATCAAACAACACCTCGT247CGATCTGCCAATTTCAAACCTTCTATTTGGCGTTATGATTACATCCAGTC
TSA: Arachis duranensis DurSNP_c35667.Ardu mRNA sequence.
HP035637.1:247-266
ATTTCTAATCATAATCAAACAACACCTCGT247CGATCTGCCAATTTCAAACCTTCTATTTGGCGTTATGATTACATCCAGTC
Arachis hypogaea DNA, clone: 8iHA04J02, cultivar: YI-0311.
DE998540.1:173-192
ATTTCTAATCATAATCAAACAACACCTCGT173CGATCTGCCAATTTCAAACCTTCTATTTGGCATTATTATGATTACATCCG
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:62418419-62418438
ATTTCTAATCATAATCAAACAATACCTCGT62418419CGATCTGCCAATTTCAAACCTTCTATTTGGCATTATGATTTCATCCAGTC
Arachis hypogaea cultivar Shitouqi chromosome B08.
CP031000.1:62531664-62531683
ATTTCTAATCATAATCAAACAACACCTCGT62531664CGATCTGCCAATTTCAAACCTTTTATTTGGCATTATGATTACATCCGGTC
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:58170168-58170187
ATTTCTAATCATAATCAAACAATACCTCGT58170168CGATCTGCCAATTTCAAACCTTCTATTTGGCATTATGATTTCATCCAGTC
Arachis ipaensis cultivar K30076 chromosome 08.
CP049899.1:58284224-58284243
ATTTCTAATCATAATCAAACAACACCTCGT58284224CGATCTGCCAATTTCAAACCTTTTATTTGGCATTATGATTACATCCGGTC
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:75377927-75377946
CGGATGTAATCATAATAATGCCAAATAGAA75377927GGTTTGAAATTGGCAGATCGACGAGGTGTTGTTTGATTATGATTAGAAAT
Arachis hypogaea cultivar Shitouqi chromosome A07.
CP030989.1:75383843-75383862
GACTGGATGTAATCATAATGCCAAATAGAA75383843GGTTTGAAATTGGCAGATCGACGAGGTGTTGTTTGATTATGATTAGAAAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGATCTGCCAATTTCAAACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGATCTGCCAATTTCAAACC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.282 | 0.273 | search_plus_done; http://172.18.8.135:50400/match?q=CGATCTGCCAATTTCAAACC&k=0&no_gap=0&offset=0&limit=50
0.367 | 0.085 | search_minus_done; http://172.18.8.135:50400/match?q=GGTTTGAAATTGGCAGATCG&k=0&no_gap=0&offset=0&limit=43
0.368 | 0.001 | cgi_end;

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