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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-11 15:19:06, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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Sequence 16 from Patent WO2013111018.
JC293910.1:1771-1790
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT1771CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
Sequence 16 from patent US 9574202.
KH569199.1:1771-1790
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT1771CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
UCRCS01_05bh01_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_05bh01, mRNA sequence.
CB293032.1:127-146
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT127CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
UCRCR01_06F18_r Clementine Mandarin Albedo at Rind Separation cDNA Library Citrus reticulata cDNA clone CR_CEa06F18, mRNA sequence.
CF831473.1:51-70
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT51CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
UCRCS04_0002C17_r Ruby Orange Developing Flower cDNA Library Citrus sinensis cDNA clone CS_REb0002C17, mRNA sequence.
CN182254.1:176-195
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT176CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
C04004G01SK FlavFr1 Citrus clementina cDNA clone C04004G01, mRNA sequence.
CX291776.1:140-159
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT140CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
UCRCS11_03F12_f Parent Washington Navel Orange Scale-Infested Rind cDNA Library UCRCS11 Citrus sinensis cDNA clone CS_WEd0003F12, mRNA sequence.
DN619014.1:155-174
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT155CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
USDA-FP/ARO_14832 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-18_G12 5', mRNA sequence.
DN959002.1:89-108
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT89CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
KN0AAP2YE20FM1 Fruit-TF Citrus clementina cDNA 5', mRNA sequence.
DY261268.1:123-142
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT123CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA10BD07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY262926.1:118-137
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT118CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA12DE07RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY263837.1:71-90
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT71CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA1BC06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY266570.1:172-191
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT172CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA38DB11RM2 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY275216.1:127-146
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT127CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
IC0AAA40BG06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY276179.1:172-191
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT172CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA75AA05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY290292.1:67-86
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT67CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA78BB11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY291490.1:195-214
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT195CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA94BF08RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY298022.1:91-110
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT91CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
CS00-C3-700-036-B10-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY695415.1:285-304
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT285CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
IC0AAA78BB11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA78BB11, mRNA sequence.
FC880599.1:195-214
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT195CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA38DB11RM2 IVIA1 Citrus clementina cDNA clone IC0AAA38DB11, mRNA sequence.
FC881349.1:122-141
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT122CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
IC0AAA75AA05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA75AA05, mRNA sequence.
FC882711.1:67-86
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT67CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA12DE07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA12DE07, mRNA sequence.
FC894322.1:71-90
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT71CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA40BG06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA40BG06, mRNA sequence.
FC904495.1:172-191
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT172CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA1BC06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA1BC06, mRNA sequence.
FC906164.1:172-191
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT172CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA94BF08RM1 IVIA1 Citrus clementina cDNA clone IC0AAA94BF08, mRNA sequence.
FC913173.1:91-110
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT91CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
IC0AAA10BD07RM1 IVIA1 Citrus clementina cDNA clone IC0AAA10BD07, mRNA sequence.
FC914684.1:118-137
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT118CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
KN0AAP2YE20FM1 TF Citrus clementina cDNA clone KN0AAP2YE20, mRNA sequence.
FC926783.1:123-142
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT123CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
C34107F09EF PostHarvP1 Citrus clementina cDNA clone C34107F09, mRNA sequence.
FC931666.1:68-87
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT68CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
Citrus sinensis CitLCYb2 mRNA for LCYb2, partial cds.
AB719393.1:16-35
CTTTAGCTAAAGTTT16CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
Citrus sinensis capsanthin/capsorubin synthase (CCS) gene, complete cds.
AF169241.1:1771-1790
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT1771CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
Citrus sinensis cultivar Navel lycopene beta-cyclase (bLCY2) mRNA, bLCY2-a allele, partial cds.
FJ516403.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
Citrus x paradisi cultivar Star Ruby lycopene beta-cyclase (bLCY2) mRNA, bLCY2-b allele, partial cds.
FJ516404.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
Citrus x paradisi chromoplast lycopene beta-cyclase (BLCY2) mRNA, complete cds; nuclear gene for chromoplast product.
GQ214768.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
Citrus reshni lycopene beta-cyclase 2 (LYC2) gene, partial cds.
JX566716.1:5-24
GTTT5CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
Citrus maxima LCY2B mRNA, complete cds.
KP462731.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
Citrus sinensis lycopene beta-cyclase (LCYb2a) mRNA, complete cds.
MG492007.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
Citrus sinensis lycopene beta-cyclase (LCYb2b) mRNA, complete cds.
MG492008.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
Citrus sinensis lycopene beta-cyclase 2 (BLCY2) gene, BLCY2-a allele, complete cds.
OP441054.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACCTTCATTTTCCCTATTTCCATTA
Citrus sinensis lycopene beta-cyclase 2 (BLCY2) gene, BLCY2-b allele, complete cds.
OP441055.1:50-69
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT50CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
Citrus sinensis genome assembly, chromosome: 5.
OY754322.1:17219517-17219536
CGTTTTCTCCTTCTCCTTTAGCTAAAGTTT17219517CGCAAATAATTGATTCAACATCATCACATTCATTTTCGCTATTTCCATTA
Citrus sinensis genome assembly, chromosome: 5.
OY754322.1:27616935-27616954
TAATGGAAATAGGGAAAATGAAGGTGATGA27616935TGTTGAATCAATTATTTGCGAAACTTTAGCTAAAGGAGAAGGAGAAAACG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGCAAATAATTGATTCAACA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCAAATAATTGATTCAACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.738 | 1.729 | search_plus_done; http://172.18.8.135:50400/match?q=CGCAAATAATTGATTCAACA&k=0&no_gap=0&offset=0&limit=50
1.856 | 0.118 | search_minus_done; http://172.18.8.135:50400/match?q=TGTTGAATCAATTATTTGCG&k=0&no_gap=0&offset=0&limit=10
1.857 | 0.001 | cgi_end;

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