GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:40:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Lactuca serriola Serrassy_T_P2_10489 mRNA sequence.
JO024544.1:85-104
GGTACAAATTTCATTATCACACACCCCACA85CGCAACCAACCAAATTTACCCTTTTACATTTTATACCGTATGTGAGACTT
QGA6F11.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGA6F11, mRNA sequence.
BQ848122.1:303-322
AAGTCTCACATACGGTATAAAATGTAAAAG303GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGTACC
QGC14I11.yg.ab1 QG_ABCDI lettuce salinas Lactuca sativa cDNA clone QGC14I11, mRNA sequence.
BQ859980.1:303-322
AAGTCTCACATACGGTATAAAATGTAAAAG303GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGTACC
QGE17E22.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGE17E22, mRNA sequence.
BQ982761.1:246-265
AAGTCTCACATACGGTATAAAATGTAAAAG246GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGCGATAATGAAATTTGTACC
QGE5I09.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGE5I09, mRNA sequence.
BQ984952.1:548-567
AAGTCTCACATACGGTATAAAATGTAAAAG548GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGTACC
QGH12O23.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGH12O23, mRNA sequence.
BU006957.1:548-567
AAGTCTCACATATGGTATAAAATGTAAAAG548GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGTACC
QGH7B02.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGH7B02, mRNA sequence.
BU008266.1:547-566
AAGTCTCACATACGGTATAAAATGTAAAAG547GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGTACC
QGJ4P16.yg.ab1 QG_EFGHJ lettuce serriola Lactuca serriola cDNA clone QGJ4P16, mRNA sequence.
BU013562.1:548-567
AAGTCTCACATACGGTATAAAATGTAAAAG548GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGTACC
CLLX14525.b1_J08.ab1 CLL(XYZ) lettuce saligna Lactuca saligna cDNA clone CLLX14525, mRNA sequence.
DW047895.1:298-317
AAGTCTCACATACGGTATAAAATGTAAAAG298GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGTACC
TSA: Lactuca sativa Letassy_X1_1317 mRNA sequence.
JI578033.1:2155-2174
AAGTCTCACATACGGTATAAAATGTAAAAG2155GGTAAATTTGGTTGGTTGCGTGTGGGGTGTGTGATAATGAAATTTGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGCAACCAACCAAATTTACC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCAACCAACCAAATTTACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.106 | 0.098 | search_plus_done; http://172.18.8.135:50400/match?q=CGCAACCAACCAAATTTACC&k=0&no_gap=0&offset=0&limit=50
0.306 | 0.200 | search_minus_done; http://172.18.8.135:50400/match?q=GGTAAATTTGGTTGGTTGCG&k=0&no_gap=0&offset=0&limit=49
0.312 | 0.006 | cgi_end;

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