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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:04:29, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:31078458-31078477
CACTCTTCGATATAGGCATTTCAGTTGTGC31078458CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:43225209-43225228
CACTCTTCGATATAGGCATTTCAGTTGTGC43225209CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus hybrid cultivar cultivar Royalty chromosome 7.
CP141959.1:34377024-34377043
CACTCTTCGATATAGGCATTTCAGTTGTGC34377024CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:29246069-29246088
CATTCTTCGATATAGACATTTCAATTATGT29246069CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143360.1:2009220-2009239
CACTCTTCGATATAGGCATTTCAGTTGTGC2009220CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:17414715-17414734
CACTCTTCGATATAGGCATTTCAGTTGTGC17414715CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGCAACTTCTT
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143369.1:29765246-29765265
CATTCTTCGATATAGACATTTCAATTATGT29765246CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus hybrid cultivar cultivar SH6 chromosome 14.
CP143371.1:28633326-28633345
CACTCTTCGATATAGGCATTTCAGTTGTGC28633326CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus hybrid cultivar cultivar SH6 chromosome 2.
CP143376.1:7829228-7829247
CACTCTTCGATATAGGCATTTGAGTTGTGC7829228CGCATGCTGACATGTTGAATCTCTTTAAAACCTTCTCAATGTAACTTCTT
Malus hybrid cultivar cultivar SH6 chromosome 12.
CP143386.1:27590871-27590890
CATTCTTCGATATAGACATTTCAATTGTGT27590871CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus sylvestris genome assembly, chromosome: 12.
OU696514.1:29945512-29945531
CATTCTTCGATATAGACATTTCAATTATGT29945512CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus domestica genome assembly, chromosome: 5.
OU696681.1:32807700-32807719
CACTCTTCGATATAGGCATTTCAGTTGTGC32807700CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 12.
OU696688.1:29768216-29768235
CATTCTTCGATATAGACATTTCAATTATGT29768216CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus domestica genome assembly, chromosome: 14.
OU696690.1:28438415-28438434
CACTCTTCGATATAGGCATTTCAGTTGTGC28438415CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 15.
OU696691.1:8788343-8788362
CACTCTTCGATATAGGCATTTCAGTTGTGC8788343CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 3.
OU744544.1:2120522-2120541
CACTCTTCGATATAGGCATTTCAGTTGTGC2120522CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 10.
OU744551.1:42513172-42513191
CACTCTTCGATATAGGCATTTCAGTTGTGC42513172CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 12.
OU744553.1:30520896-30520915
CATTCTTCGATATAGACATTTCAATTATGT30520896CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus domestica genome assembly, chromosome: 14.
OU744555.1:29155777-29155796
CACTCTTCGATATAGGCATTTCAGTTGTGC29155777CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 3.
OU744955.1:2142304-2142323
CACTCTTCGATATAGGCATTTCAGTTGTGC2142304CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 12.
OU744964.1:29680455-29680474
CATTCTTCGATATAGACATTTCAATTATGT29680455CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus domestica genome assembly, chromosome: 14.
OU744966.1:29192642-29192661
CACTCTTCGATATAGGCATTTCAGTTGTGC29192642CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 15.
OU744967.1:1311040-1311059
CACTCTTCGATATAGGCATTTCAGTTGTGC1311040CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 12.
OU745002.1:29724773-29724792
CATTCTTCGATATAGACATTTCAATTATGT29724773CGCATGCTGACATGTTGAATCTCTTTGAAACTTTCTCAATGGTTACTTTG
Malus domestica genome assembly, chromosome: 14.
OU745004.1:29071899-29071918
CACTCTTCGATATAGGCATTTCAGTTGTGC29071899CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus domestica genome assembly, chromosome: 15.
OU745005.1:8619483-8619502
CACTCTTCGATATAGGCATTTCAGTTGTGC8619483CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus x robusta genome assembly, chromosome: 7.
OY720331.1:35607318-35607337
CACTCTTCGATATAGGCATTTCAGTTGTGC35607318CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:3536971-3536990
CACTCTTCGATATAGGCATTTCAGTTGTGC3536971CGCATGCTGACATGTTGAATCTATTTAAAACTTTCTCAATGTAACTTCTT
Malus x robusta genome assembly, chromosome: 17.
OY720341.1:551720-551739
CATTCTTCAATATAGACATTCCACTTGTGT551720CGCATGCTGACATGTTGAATCTCTTTAAAACTTTCTCAATGATTATTTTG
Malus hybrid cultivar cultivar Flame chromosome 4.
CP141913.1:29458177-29458196
CAAAATAATCATTGAGAAAGTTTTAAAGAG29458177ATTCAACATGTCAGCATGCGACACAATTGGAATGTCTATATTGAAGAATG
Malus hybrid cultivar cultivar Flame chromosome 5.
CP141914.1:3089062-3089081
AAGAAGTTACATTGAGAAAGTTTTAAATAG3089062ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141921.1:2491886-2491905
CAAAGTAACCATTGAGAAAGTTTCAAAGAG2491886ATTCAACATGTCAGCATGCGACATAATTGAAATGTCTATATCGAAGAATG
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141923.1:3154525-3154544
AAGAAGTTACATTGAGAAAGTTTTAAATAG3154525ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar Flame chromosome 7.
CP141933.1:2220507-2220526
AAGAAGTTACATTGAGAAAGTTTTAAATAG2220507ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar Flame chromosome 10.
CP141936.1:44172756-44172775
AAGAAGTTACATTGAGAAAGTTTTAAATAG44172756ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar Flame chromosome 12.
CP141938.1:2451103-2451122
CAAAGTAACCATTGAGAAAGTTTCAAAGAG2451103ATTCAACATGTCAGCATGCGACATAATTGAAATGTCTATATCGAAGAATG
Malus hybrid cultivar cultivar Flame chromosome 13.
CP141939.1:44220901-44220920
AAGAAGTTACATTGAGAAAGTTTTAAAGAG44220901ATTCAACATGTCAGCATGCGGCACAACTCGAATGCCTATATTGAAGAGTG
Malus hybrid cultivar cultivar Flame chromosome 14.
CP141940.1:3247050-3247069
AAGAAGTTACATTGAGAAAGTTTTAAATAG3247050ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:47627497-47627516
AAGAAGTTACATTGAGAAAGTTTTAAATAG47627497ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141956.1:29360717-29360736
CAAAATAATCATTGAGAAAGTTTTAAAGAG29360717ATTCAACATGTCAGCATGCGACACAATTGGAATGTCTATATTGAAGAATG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:30394813-30394832
AAGAAGTTACATTGAGAAAGTTTTAAATAG30394813ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATAGAAGAGTG
Malus hybrid cultivar cultivar Royalty chromosome 12.
CP141964.1:469733-469752
AAGAAGTTACATTGAGAAAGTTTTAAATAG469733ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:29201833-29201852
CAAAATAATCATTAAGAAAGTTTTAAAGAG29201833ATTCAACATGTCAGCATGCGACACAATTGGAATGTCTATATTGAAGAATG
Malus hybrid cultivar cultivar Royalty chromosome 4.
CP141973.1:29240505-29240524
CAAAATAATCATTAAGAAAGTTTTAAAGAG29240505ATTCAACATGTCAGCATGCGACACAATTGGACTGTCTATATTGAAGAATG
Malus hybrid cultivar cultivar Royalty chromosome 14.
CP141983.1:3161255-3161274
AAGAAGTTACATTGAGAAAGTTTTAAATAG3161255ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:28626120-28626139
CAAAATAATCATTGAGAAAGTTTTAAAGAG28626120ATTCAACATGTCAGCATGCGACACAAGTGGAATGTCTAAATTGAAGAATG
Malus hybrid cultivar cultivar SH6 chromosome 4.
CP143378.1:28667725-28667744
CAAAATAATCATTGAGAAAGTTTTAAAGAG28667725ATTCAACATGTCAGCATGCGACACAATTGGAATATCTATATTGAAGAATG
Malus hybrid cultivar cultivar SH6 chromosome 6.
CP143380.1:22578237-22578256
AAGAAGTTACATTGAGAAAGTTTTAAAGAG22578237ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar SH6 chromosome 7.
CP143381.1:31005993-31006012
AAGAAGTTACATTGAGAAAGTTTTAAAGAG31005993ATTCAACATGTCAGCATGCGGCACAACGCAAATGCCTATATCGAAGAGTG
Malus hybrid cultivar cultivar SH6 chromosome 13.
CP143387.1:36828578-36828597
AAGAAGTTACATTGAGAAAGTTTTAAAGAG36828578ATTCAACATGTCAGCATGCGGCACAACTCAAATGCCTATATCGAAGAGTG
Malus sylvestris genome assembly, chromosome: 17.
OU696519.1:13143894-13143913
AAGAAGTTGCATTGAGAAAGTTTTAAATAG13143894ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus domestica genome assembly, chromosome: 4.
OU696680.1:30709814-30709833
CAAAAAAATCATTGAGAAAGTTTTAAAGAG30709814ATTCAACATGTCAGCATGCGACACAATTGGAATGTCTATATTGAAGAATG
Malus domestica genome assembly, chromosome: 10.
OU696686.1:44054932-44054951
AAGAAGTTACATTGAGAAAGTTTTAAATAG44054932ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus domestica genome assembly, chromosome: 17.
OU696693.1:12967505-12967524
AAGAAGTTGCATTGAGAAAGTTTTAAATAG12967505ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus domestica genome assembly, chromosome: 4.
OU744545.1:30627810-30627829
CAAAATAATCATTAAGAAAGTTTTAAAGAG30627810ATTCAACATGTCAGCATGCGACACAATTGGAATGTCTATATTGAAGAATG
Malus domestica genome assembly, chromosome: 4.
OU744545.1:30669939-30669958
CAAAATAATCATTAAGAAAGTTTTAAAGAG30669939ATTCAACATGTCAGCATGCGACACAATTGGACTGTCTATATTGAAGAATG
Malus domestica genome assembly, chromosome: 7.
OU744548.1:32500856-32500875
AAGAAGTTACATTGAGAAAGTTTTAAATAG32500856ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus domestica genome assembly, chromosome: 13.
OU744554.1:42917783-42917802
AAGAAGTTACATTGAGAAAGTTTTAAAGAG42917783ATTCAACATGTCAGCATGCGGCACAACTCGAATGCCTATATTGAAGAGTG
Malus domestica genome assembly, chromosome: 17.
OU744558.1:13796266-13796285
AAGAAGTTGCATTGAGAAAGTTTTAAATAG13796266ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus domestica genome assembly, chromosome: 4.
OU744956.1:30876012-30876031
CAAAATAATCATTGAGAAAGTTTTAAAGAG30876012ATTCAACATGTCAGCATGCGACACAATTGGAATGTCTATATTGAAGAATG
Malus domestica genome assembly, chromosome: 17.
OU744969.1:13195446-13195465
AAGAAGTTGCATTGAGAAAGTTTTAAATAG13195446ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus domestica genome assembly, chromosome: 4.
OU744994.1:30830391-30830410
CAAAATAATCATTAAGAAAGTTTTAAAGAG30830391ATTCAACATGTCAGCATGCGACACAATTGGAATGTCTATATTGAAGAATG
Malus domestica genome assembly, chromosome: 4.
OU744994.1:30872520-30872539
CAAAATAATCATTAAGAAAGTTTTAAAGAG30872520ATTCAACATGTCAGCATGCGACACAATTGGACTGTCTATATTGAAGAATG
Malus domestica genome assembly, chromosome: 7.
OU744997.1:31738168-31738187
AAGAAGTTACATTGAGAAAGTTTTAAATAG31738168ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:23647939-23647958
AAGAAGTTGCATTGAGAAAGTTTTAAATAG23647939ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Malus x robusta genome assembly, chromosome: 13.
OY720337.1:2250907-2250926
CAAAGTAACCATTGAGAAAGTTTCAAAGAG2250907ATTCAACATGTCAGCATGCGACACAATTGAAATGTCTATATCGAAGAATG
Pyrus communis genome assembly, chromosome: 4.
OY757071.1:10815109-10815128
AAGAAGTTACATTAAGAAAGTTTTAAAGAG10815109ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:16597614-16597633
GAGAAGTTACATTGAGAAAGTTTTAAAGAG16597614ATTCAACATGTCAGCATGCGGCACAACTGAAATGCCTATATCGAAGAGTG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGCATGCTGACATGTTGAAT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCATGCTGACATGTTGAAT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.116 | 0.107 | search_plus_done; http://172.18.8.135:50400/match?q=CGCATGCTGACATGTTGAAT&k=0&no_gap=0&offset=0&limit=50
0.177 | 0.061 | search_minus_done; http://172.18.8.135:50400/match?q=ATTCAACATGTCAGCATGCG&k=0&no_gap=0&offset=0&limit=21
0.203 | 0.026 | cgi_end;

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