GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2026-02-22 21:11:57, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Vigna angularis mRNA, clone: VES03L04.
HX943477.1:99-118
AGATTTCTCTGGATAACGCATATCACGTGT99CGCCTTCTTCTTCACTCCACATAACTTCAAAGCTTCCATTTTTCTGGTTT
Acinetobacter sp. WCHAc010052 chromosome, complete genome.
CP032143.1:2251356-2251375
ACTCCTCCACCAGATCATAACGGTCATTAC2251356CGCCTTCTTCTTCACTCCACATCAGATGATGTGCTTCATCCACAACGAGT
Acinetobacter baumannii strain WPB103 chromosome.
CP034427.1:1910077-1910096
ACTCTTCGACAAGATCATAACGATCATTAC1910077CGCCTTCTTCTTCACTCCACATTAAATGGTGTGCTTCATCGACTACAAGT
Acinetobacter venetianus strain TUST-DM21 chromosome, complete genome.
CP060161.1:2585811-2585830
ACTCTTCAACGAGGTCATAACGATCATTGC2585811CGCCTTCTTCTTCACTCCACATCAAATGATGTGCTTCATCGACAACCAAT
Acinetobacter seifertii strain AS48 chromosome, complete genome.
CP061626.1:2810499-2810518
GCTCTTCAACCAAGTCGTAACGATCATTAC2810499CGCCTTCTTCTTCACTCCACATTAAGTGATGCGCTTCATCGACAACGAGT
Acinetobacter sp. CS-2 chromosome, complete genome.
CP067019.1:1925922-1925941
GCTCTTCAACCAAATCGTAACGGTCATTAC1925922CGCCTTCTTCTTCACTCCACATCAGGTGATGAGCTTCATCCACCACCAGA
Acinetobacter ursingii strain FDAARGOS_1095 chromosome, complete genome.
CP068180.1:2262534-2262553
ATTCTTCGACCAGATCGTAACGGTCATTAC2262534CGCCTTCTTCTTCACTCCACATCAAATGATGTGCTTCATCGACCACAAGC
Acinetobacter sp. TAC-1 chromosome, complete genome.
CP118892.1:3102038-3102057
GCTCTTCAACCAGATCATAACGGTCATTAC3102038CGCCTTCTTCTTCACTCCACATCAAATGATGCGCTTCATCGACCACTAAC
Acinetobacter chinensis strain SAAc573 chromosome, complete genome.
CP127923.1:2293971-2293990
ACTCCTCCACCAGATCATAACGGTCATTAC2293971CGCCTTCTTCTTCACTCCACATCAGATGATGTGCTTCATCCACGACGAGT
Acinetobacter calcoaceticus strain AC001_UM chromosome, complete genome.
CP130683.1:3688287-3688306
GCTCTTCAATTAAATCGTAGCGGTCATTCC3688287CGCCTTCTTCTTCACTCCACATCAAATGATGTGCTTCATCGACCACGAGC
Acinetobacter sp. A1-4-2 chromosome, complete genome.
CP157981.1:1762823-1762842
GTTCTTCAACCAAGTCATAACGGTCATTAC1762823CGCCTTCTTCTTCACTCCACATCAGGTGATGTGCTTCATCCACCACCAGC
Acinetobacter venetianus strain AVYS1 chromosome, complete genome.
CP173025.1:2397141-2397160
GTTCTTCGACTAGATCATAACGATCATTGC2397141CGCCTTCTTCTTCACTCCACATCAAATGATGTGCTTCATCGACAACCAAT
Cerastoderma glaucum genome assembly, chromosome: 18.
OZ205198.1:34171399-34171418
GATCTGATTTCTCATTCACTCTCCACTCCA34171399CGCCTTCTTCTTCACTCCACGCATTCTTCTTCACTCATCAAAAACTATGA
Pipistrellus hanaki genome assembly, chromosome: 3.
OZ203235.1:74127015-74127034
TGTGAAACTGGGGGGAGGAGACAGAAATAT74127015GTGGAGTGAAGAAGAAGGCGGAGCCCTGGGACAATTTTCAGATTTCTCCT
Vigna angularis var. angularis DNA, chromosome 3, almost complete sequence, cultivar: Shumari.
AP015036.1:26630367-26630386
AAACCAGAAAAATGGAAGCTTTGAAGTTAT26630367GTGGAGTGAAGAAGAAGGCGACACGTGATATGCGTTATCCAGAGAAATCT
Eleocharis dulcis isolate ONT chromosome 21.
CP161223.1:4401138-4401157
AGTTTTACGAGGTACAATGATCTGATCTTG4401138GTGGAGTGAAGAAGAAGGCGGGTGTAAGTGGTAGTATCCAACCGAACTCC
Fraxinus pennsylvanica genome assembly, chromosome: 3.
OU503038.1:1486491-1486510
AATAAGAGAGAAGATAAGAAGAAGAAGGCG1486491GTGGAGTGAAGAAGAAGGCGGTGTGTTTGCGGAACCAGTTCAGGTGTGAG
Eleocharis quinqueflora genome assembly, chromosome: 50.
OZ060336.1:947731-947750
AGTTTCCCGAGGTGCGAAGACCTGGTCTTG947731GTGGAGTGAAGAAGAAGGCGGGTGTAAGTGGCAGTCTCCAACCGAACTGC
Ranunculus sceleratus genome assembly, chromosome: 2.
OZ205664.1:79896814-79896833
GCATGAAGTAGATGAACAACGACAAATTCG79896814GTGGAGTGAAGAAGAAGGCGATGGGGAAGAAGAAGAACAGGAGCCCTTAG
Ranunculus sceleratus genome assembly, chromosome: 10.
OZ205672.1:114753534-114753553
GCATGAAGTAGATGAACGACGACAAATTCG114753534GTGGAGTGAAGAAGAAGGCGATGGGGAAGAAGAAGAACAAGAGCCCTTAT
Acinetobacter equi strain 114, complete genome.
CP012808.1:2159491-2159510
ACTGGTTGTCGATGAAGCACATCACTTAAT2159491GTGGAGTGAAGAAGAAGGCGGTAATGATCGTTATGATTTAGTAGAAGAAT
Acinetobacter dispersus strain NCCP 16014 chromosome, complete genome.
CP041970.1:182407-182426
ACTTGTGGTTGATGAAGCACATCACTTGAT182407GTGGAGTGAAGAAGAAGGCGGTAATGACCGCTACGATTTGGTTGAAGAAT
Acinetobacter seifertii strain AS73 chromosome, complete genome.
CP061561.1:1221472-1221491
GCTTGTAGTCGATGAAGCGCATCACTTAAT1221472GTGGAGTGAAGAAGAAGGCGGCAACGATCGTTACGACTTGGTTGAAGAGC
Acinetobacter seifertii strain AS72 chromosome, complete genome.
CP061565.1:1078898-1078917
ACTCGTTGTCGATGAAGCGCATCACTTAAT1078898GTGGAGTGAAGAAGAAGGCGGTAATGATCGTTACGATTTAGTTGAAGAAC
Acinetobacter seifertii strain AS70 chromosome, complete genome.
CP061571.1:1203928-1203947
GCTTGTAGTCGATGAAGCGCATCACTTAAT1203928GTGGAGTGAAGAAGAAGGCGGCAACGATCGTTACGACTTGGTTGAAGAGC
Acinetobacter seifertii strain AS52 chromosome, complete genome.
CP061609.1:1119747-1119766
ACTCGTTGTCGATGAAGCGCATCACTTAAT1119747GTGGAGTGAAGAAGAAGGCGGTAATGATCGTTACGATTTAGTTGAAGAAC
Acinetobacter seifertii strain AS6 chromosome, complete genome.
CP061691.1:1184117-1184136
ACTCGTTGTCGATGAAGCGCATCACTTAAT1184117GTGGAGTGAAGAAGAAGGCGGTAATGATCGTTACGATTTAGTTGAAGAAC
Acinetobacter haemolyticus strain w12 chromosome, complete genome.
CP085284.1:1310264-1310283
TCTGGTGGTGGATGAAGCTCATCACCTGAT1310264GTGGAGTGAAGAAGAAGGCGGTAATGACCGTTACGATTTGGTTGAAGAGC
Acinetobacter ursingii strain RIVM_C011601 chromosome, complete genome.
CP089038.1:1570949-1570968
GCTTGTGGTCGATGAAGCACATCATTTGAT1570949GTGGAGTGAAGAAGAAGGCGGTAATGACCGTTACGATCTGGTCGAAGAAT
Acinetobacter sp. NyZ410 chromosome, complete genome.
CP094620.1:1714091-1714110
GTTAGTGGTCGATGAAGCGCATCATTTGAT1714091GTGGAGTGAAGAAGAAGGCGGTAATGACCGTTATGATCTGGTTGAAGAGC
Acinetobacter sp. C32I chromosome, complete genome.
CP098480.1:4114145-4114164
ATTGGTGGTCGATGAAGCCCATCATTTGAT4114145GTGGAGTGAAGAAGAAGGCGGTAATGATCGTTATGATCTGGTCGAAGAAT
Acinetobacter sp. XH1639 chromosome, complete genome.
CP157435.1:878294-878313
ACTGGTAGTCGATGAAGCACACCATTTAAT878294GTGGAGTGAAGAAGAAGGCGGTAATGATCGTTATGATCTTGTCGAAGAGT
Acinetobacter ursingii strain E5131942 chromosome, complete genome.
CP167777.1:1469151-1469170
GCTTGTGGTCGATGAAGCACATCATTTGAT1469151GTGGAGTGAAGAAGAAGGCGGTAATGACCGTTACGATCTGGTCGAAGAAT
Euchloe insularis genome assembly, chromosome: 12.
OZ208620.1:6274627-6274646
GTTTTTTAAAACCAACGAGGTCGTAGTCAG6274627GTGGAGTGAAGAAGAAGGCGGTAATGCATTCCACAATTTGTTGTGCGTGG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGCCTTCTTCTTCACTCCAC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCCTTCTTCTTCACTCCAC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.200 | 0.191 | search_plus_done; http://172.18.8.135:50800/match?q=CGCCTTCTTCTTCACTCCAC&k=0&no_gap=0&offset=0&limit=50
0.250 | 0.050 | search_minus_done; http://172.18.8.135:50800/match?q=GTGGAGTGAAGAAGAAGGCG&k=0&no_gap=0&offset=0&limit=37
0.265 | 0.014 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).