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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-05 21:01:41, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

TSA: Pyrus x bretschneideri Unigene66182_XinShao mRNA sequence.
JR653365.1:126-145
GCAGAGGGAATCAATGATTGCGTTTGCCGC126CGCGAACTCTCCTCTGTACCACCCGATAATTGCGTCCTTCGCCAGCTGGT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141955.1:2010882-2010901
GCAGAGGGCATCGATGATTGCATTTGCCGC2010882CGCGAACTCTCCTCTGTACCACCCGATAATTGCGTCCTTCGCCAGCTGGT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141972.1:2003438-2003457
GCAGAGGGCATCGATGATTGCATTTGCCGC2003438CGCGAACTCTCCTCTGTACCACCCGATAATTGCGTCCTTCGCCAGCTGGT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:36698872-36698891
GGTGGAAACCCCTAATATCGATCTCTTTTC36698872CGCGAACTCTCCTCTGTACCGCCGCCTCTGCCGCCGTTTCAAGATCGGGG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:41539681-41539700
GGTGGACACCCCTAAGATCGATCTCTTTTC41539681CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCTAGATCGGGGCTT
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:92980281-92980300
GGTGGAAACCCCTAATATCGATCTCTTTTC92980281CGCGAACTCTCCTCTGTACCGCCGCCGCCGTCGTTTCTAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:127797138-127797157
GGTGGAAACCCCTAATATTGATCTCTTTCT127797138CGCGAACTCTCCTCTGTACCGCCGCCGCCTCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:227820801-227820820
GGTGGAAACCCCTAATATCGATCTCTTTCT227820801CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:261040758-261040777
GGTGGAAACCCCTAATATCAATCTCTTTCT261040758CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:264736560-264736579
GGTGGAAACCCCTAATATCGATTTATTTCT264736560CGCGAACTCTCCTCTGTACCACCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:279668715-279668734
GGTGGAAACCCCTAAGATCGATCTCTTTTC279668715CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCATTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:295547618-295547637
GGGTGGAAACCCTTATATCGATCTCTTTTC295547618CGCGAACTCTCCTCTGTACCGCTGCCGCCGCAGTTTCAAGATCGGGGATG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:324082584-324082603
GGTGGAAACCCCTACTATCGATCACTTTTC324082584CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:344528626-344528645
GGTGGAAACCCCTAATATCGATCTCTTTTC344528626CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGTGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:345773986-345774005
GGTGGAAACCCCTAATATCGATCTCTTTTC345773986CGCGAACTCTCCTCTGTACCGCCGCCGCCACCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 1.
OX465595.1:398908821-398908840
GGTGGAAACCCCTAAGATCGATCTCTTTCT398908821CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGAGTTG
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:8349262-8349281
GGTGGAAACCCCTAATATCGATCTCTTTTC8349262CGCGAACTCTCCTCTGTACCGCTGCCGCCGCCATTTCAAGATCGCGGCTG
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:8456583-8456602
GGTGGAAACCCCTAAGATCGATCTCTTTTC8456583CGCGAACTCTCCTCTGTACCGCCGCCGCTGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:52167823-52167842
GGTGGAAACCCCTAATATCGATCTCTTTTC52167823CGCGAACTCTCCTCTGTACCGCCATCGCCACTTGTTCAAGATTGGGGCTG
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:73268941-73268960
GTGGAAACCCCCTAATATCGATCTCTTTTC73268941CGCGAACTCTCCTCTGTACCGCCGCCGCTGCCGTTTCAAGATCGAGGCTT
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:168813210-168813229
GGTGGAAACCCCTAATATCGATCTCTTTTC168813210CGCGAACTCTCCTCTGTACCGCCGCCGCTGCCTTTTCAAGATCGGGCTGC
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:257026243-257026262
GGTGGAAACCCCTAATATAGATCTCTTTCT257026243CGCGAACTCTCCTCTGTACCGCCGCCACCGCCATTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:257031953-257031972
GGTGGAAACCCCTAATATCGATATCTTTCT257031953CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGACCGGAGCTG
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:359895972-359895991
GGTGGAAACCCCTAATATCGATCTCTTTCT359895972CGCGAACTCTCCTCTGTACCACCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:408054442-408054461
GGTGGAAACCCCTAATATCGATCTCTTTCT408054442CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTT
Bromus sterilis genome assembly, chromosome: 2.
OX465596.1:408058647-408058666
GGGTGGAAACCCTAATATCGATCTATTTCT408058647CGCGAACTCTCCTCTGTACCGTCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:66908481-66908500
GGTGGAAACCCCTAATATAGATCTCTTTTC66908481CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCTAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:97049288-97049307
GGTGGAAACCCCTAATATCGATCTCTTTTC97049288CGCGAACTCTCCTCTGTACCGCCGCCGCCGTTTGAAGATCGGGGCTTTCT
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:188061447-188061466
GGTGGAAACCCCTAATATCGATCTCTTTTT188061447CGCGAACTCTCCTCTGTACCGCCGCCACCGCCGTTTCATGATCGGGGTTG
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:369324218-369324237
GGTGGAAACCCCTAATATCGATCTCTTTTC369324218CGCGAACTCTCCTCTGTACCCCCGCCGCCGCCGTTTCTAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:51993424-51993443
GGTGGAAACCCCTAATATCAATCTCTTTTC51993424CGCGAACTCTCCTCTGTACCGCCGCCGCCAACGTTTCAAGATCGGGGTTG
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:147954649-147954668
GGTGGAAACCCCTAATATCGATCTCTTTTC147954649CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:225903407-225903426
GGTGGAAACCCCTAATATCGATCTTTTTTC225903407CGCGAACTCTCCTCTGTACCGCCGCCGTCGCCGCTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:263733031-263733050
GGTGGAAACCCCTAATATCGATCTCTTTTC263733031CGCGAACTCTCCTCTGTACCGCCGCCGCTGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 4.
OX465598.1:334759450-334759469
GGTGGAAACCCCTAATATCGATCTCTTTTC334759450CGCGAACTCTCCTCTGTACCGTCGCCGCCGCCGTTTCTAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:113399289-113399308
GGTGGAAACCCCTAATATCGATCTCTTTCT113399289CGCGAACTCTCCTCTGTACCGCCGCCGCTGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:301815703-301815722
GGTGGAAACCCCTAATATCTATCTCTTTTC301815703CGCGAACTCTCCTCTGTACCGCCGCCGCCGTTTTAAGATCGGGGCTGCCT
Bromus sterilis genome assembly, chromosome: 5.
OX465599.1:327962000-327962019
GGTGGAAAGCCCTAATATCGATCTCTTTTC327962000CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:14700216-14700235
GATGGAAACCCCTAAGATCGATCTCTTTTC14700216CGCGAACTCTCCTCTGTACCGCCGCCGCCGTTTCAAGATCGGGGCTGCCT
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:34798070-34798089
GGTGGAAACCCCTAATATCGATCTCTTTCT34798070CGCGAACTCTCCTCTGTACCGCCGCTGCCATTTCAAGATCGGGGCTGCCT
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:39994079-39994098
GGTGGAAACCCCTAATATCGATCTCTTTTC39994079CGCGAACTCTCCTCTGTACCGCCGCCGCCACCGTTTCTAGACCGGGGCTG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:96102130-96102149
GGTGGAAACCCCTAATATCGATCTCTTTCT96102130CGCGAACTCTCCTCTGTACCGCCGCCGCCATTTCAAGATCGGGGCTGCCT
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:108230597-108230616
GGTGGAAACCCCTAATATCGATCTCTTTTC108230597CGCGAACTCTCCTCTGTACCGCCGCCGCCGTTGTTTCAAGATCAGGGCTT
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:117455216-117455235
GATGGAAACCCCTAAGATCGATCTCTTTTC117455216CGCGAACTCTCCTCTGTACCGCCGCCACCGCCGTTTGAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:176085869-176085888
CGTGGAAACCCCTAATATCGATCTCTTTCT176085869CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:194085961-194085980
GGTGGAAACCCCTAATATCAATCTCTTTTC194085961CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:251173480-251173499
GGTGGAAACCCCTAATATCGATCTCTTTTC251173480CGCGAACTCTCCTCTGTACCGATGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:251176178-251176197
CATGGAAACCCCTAATATCGATCTCTTTTC251176178CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCATTTCAATATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:274371159-274371178
GGTGGAAACCCCTAATATCGATCTCTTTTC274371159CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGATG
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:280400470-280400489
GGTGGAAACACCTACGATCGATCTCTTTTC280400470CGCGAACTCTCCTCTGTACCGCGCCGCCGCCGTTTCAAGATCGGGGCTGC
Bromus sterilis genome assembly, chromosome: 6.
OX465600.1:295390867-295390886
GGTGGAAACCCCTAATATCGATCTCTTTTT295390867CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:235863502-235863521
GATGGAAACCCCTAATATCGATCTCTTTCT235863502CGCGAACTCTCCTCTGTACCGCCGCCGCCGCCGTTTCAAGATCGGGGCTG
Bromus sterilis genome assembly, chromosome: 7.
OX465601.1:236052921-236052940
GGTGGAAACCCCTAATATCGATCTCTTTCT236052921CGCGAACTCTCCTCTGTACCCCCGCTGCCGTTTCAAGATCGGGGCTGCCT
Crataegus laevigata genome assembly, chromosome: 9.
OY756946.1:2235835-2235854
GCAGAGGGCATCGATGATTGCATTTGCCGC2235835CGCGAACTCTCCTCTGTACCACCCGATAATTGCGTCCTTCGCCAGCTGGT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGCGAACTCTCCTCTGTACC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCGAACTCTCCTCTGTACC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.370 | 0.361 | search_plus_done; http://172.18.8.135:50400/match?q=CGCGAACTCTCCTCTGTACC&k=0&no_gap=0&offset=0&limit=50
0.513 | 0.143 | search_minus_done; http://172.18.8.135:50400/match?q=GGTACAGAGGAGAGTTCGCG&k=0&no_gap=0&offset=0&limit=0
0.513 | 0.000 | cgi_end;

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