GGGenome Help | English

データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 11:25:40, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Valencia hispanica genome assembly, chromosome: 13.
OY747712.1:37903055-37903074
GGATTAACAGGTTGTCCTGATGGGGCCCTC37903055CGCTTCACACGTCTGTGTTTGTCCAAAACAGACAAGGATGAATTAATGAT
Arachis hypogaea DNA, clone: AHGS48F15.
DH961653.1:33-52
TAACACTTGCGTTTTTTTTTGTTTTTTGCT33CGCTTCACACGTCTGTGTTTTTTATTTTTTATTTTTCTTGTGTTTTTCAC
Arachis hypogaea DNA, clone: AHGS42K20.
DH962229.1:248-267
AGCGAAAAACACAAGAAAAATAAAAAATAA248AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAACTACACACAC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10125466-10125485
CCGAAAAGCACAAGAAAAATAAAAAATTAA10125466AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAACACACACACA
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10128505-10128524
GTGAAAAACACAAGAAAAATAAAAAATAAA10128505AAACACAGACGTGTGAAGCGAGCAAAAAACAAAAAAAAAACGCAAGTGTT
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10129895-10129914
AGCGAAAAACACAAGAAAAATAAAAAATAA10129895AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAACTACACACAC
Arachis hypogaea cultivar Shitouqi chromosome B05.
CP030997.1:10131415-10131434
GCAAAAAACACAAGAAAAATAAAAAATAAA10131415AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAACTACACACACA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16252790-16252809
CCGAAAAGCACAAGAAAAATAAAAAATAAA16252790AAACACAGACGTGTGAAGCGAGCGAAAAAACAAAAAAAAAAACACACACA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16255831-16255850
AGTGAAAACACAAGAAAAATAAAAAATAAA16255831AAACACAGACGTGTGAAGCGAGCAAAAAACAAAAAAAAAAACGCAAGTGT
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16257223-16257242
AGCGAAAAACACAAGAAAAATAAAAAATAA16257223AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAAAACTACACACA
Arachis ipaensis cultivar K30076 chromosome 05.
CP049896.1:16258765-16258784
GCAAAAAACACAAGAAAAATAAAAAATAAA16258765AAACACAGACGTGTGAAGCGAGCGAAAAACAAAAAAAAACTACACACACA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGCTTCACACGTCTGTGTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCTTCACACGTCTGTGTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.180 | 0.172 | search_plus_done; http://172.18.8.135:50400/match?q=CGCTTCACACGTCTGTGTTT&k=0&no_gap=0&offset=0&limit=50
0.286 | 0.106 | search_minus_done; http://172.18.8.135:50400/match?q=AAACACAGACGTGTGAAGCG&k=0&no_gap=0&offset=0&limit=48
0.292 | 0.006 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).