GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 20:04:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

CA00-XX-IA2-002-F12-EC.F Coffea arabica IA2 Coffea arabica cDNA clone CA00-XX-IA2-002-F12-EC, mRNA sequence.
GW440278.1:40-63
AAGAAAGAGAGATGCTGGGGCCTGTCTTTG40CGCTTGACGTATCCTTTGGCCTCTTTCTCGGAGTAGCAGTGGTATCCCTTCTCC
CGN-47495 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w24o12 5', mRNA sequence.
DV701322.1:684-707
GGAGAAGGGATACCACTGCTACTCCGAGAA684AGAGGCCAAAGGATACGTCAAGCGCAAAGACAGGGCCCAGCATCTCTCTTTCTT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGCTTGACGTATCCTTTGGCCTCT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGCTTGACGTATCCTTTGGCCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.252 | 0.243 | search_plus_done; http://172.18.8.135:50400/match?q=CGCTTGACGTATCCTTTGGCCTCT&k=0&no_gap=0&offset=0&limit=50
0.351 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGGCCAAAGGATACGTCAAGCG&k=0&no_gap=0&offset=0&limit=49
0.352 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).