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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-09 18:46:37, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Arvicola amphibius genome assembly, chromosome: 11.
LR862391.2:103523235-103523251
TCAGAGTGAGTCTGACTGGAATTTCCCTCT103523235CGGAAAGAGGGAAGATGTTGAGCCACTCTCCAGATCAAGTAAGAAAT
Onychomys torridus genome assembly, chromosome: 5.
LR877192.1:26094047-26094063
CTTGCTGGGATAAGCCTTCCAGAGAACGTG26094047CGGAAAGAGGGAAGATGGAGAGAGTAAAAGGCCAAGGTTTTGCTATA
Onychomys leucogaster genome assembly, chromosome: 5.
OX460375.1:26608865-26608881
ACTTGCTGGGTAAGCCTTCCAGAGAACGTG26608865CGGAAAGAGGGAAGATGGAGAGAGTAAAAGGCCAAGGTTTTGTTATA
Onychomys leucogaster genome assembly, chromosome: 5.
OX460422.1:27113208-27113224
ACTTGCTGGGTAAGCCTTCCAGAGAACGTG27113208CGGAAAGAGGGAAGATGGAGAGAGTAAAAGGCCAAGGTTTTGTTATA
Onychomys leucogaster genome assembly, chromosome: 8.
OX460425.1:91624504-91624520
GTAGGGTGACTTGGATGCCGGCGGTCCCTG91624504CGGAAAGAGGGAAGATGGCGCTTGATGGGCCAGAGCAGGTAAGGCTG
Onychomys torridus genome assembly, chromosome: 5.
OX460886.1:26094047-26094063
CTTGCTGGGATAAGCCTTCCAGAGAACGTG26094047CGGAAAGAGGGAAGATGGAGAGAGTAAAAGGCCAAGGTTTTGCTATA
Stenella coeruleoalba genome assembly, chromosome: 5.
OX596389.1:24702834-24702850
GGAGAACGGTAGAACAGTGGGCTCTGGGAG24702834CGGAAAGAGGGAAGATGACACCCCCCCGAGTGTGGACATTGGTCAAG
Stenella coeruleoalba genome assembly, chromosome: 17.
OX596402.1:51770065-51770081
GCGGACACACGGGAACTAAGAAGATTGTTG51770065CGGAAAGAGGGAAGATGACGCCGATTGGAAACTGCTGGCTCAGATGG
Lateolabrax maculatus chromosome Lm18.
CP027279.1:8824878-8824894
TGGAGCGGGGGTGGTGCAGGGTGAGAGAAG8824878CGGAAAGAGGGAAGATGGATAGACACATAAATACAACAGCAATTAAC
Lateolabrax maculatus linkage group 9 genomic sequence, sequence.
CP032606.1:15828707-15828723
TGGAGCGGGGGTGGTGCAGGGTGAGAGAAG15828707CGGAAAGAGGGAAGATGGATAGACACATAAATACAACAGCAATTAAC
Danio rerio strain T5D chromosome 6.
CP068740.1:13719835-13719851
GCAGAGCTGAACGCCTGGTGATGAAGCCAA13719835CGGAAAGAGGGAAGATGATACTCAGGGACAGCGCAAAATGAAGGTTT
Takifugu rubripes genome assembly, chromosome: 1.
LR584231.2:21932197-21932213
TTCCTGTGAGCAAGAAAAAACGAGAGAGAG21932197CGGAAAGAGGGAAGATGAGAAGAGGAAGACTGACGTCCAGGCAGCTT
Microcaecilia unicolor genome assembly, chromosome: 5.
LR594636.1:207435735-207435751
GGGAGAGAGGAAAATGCTAGAGGGAGGGGA207435735CGGAAAGAGGGAAGATGCTAGATGGAAAAGGGGTACAGAGAGAGAGA
Thalassophryne amazonica genome assembly, chromosome: 4.
LR722969.1:28012636-28012652
GCCAAAGAGGAAGACACCCAGAACAGTTCA28012636CGGAAAGAGGGAAGATGAGGGTATAAAAAAAACCAAACAAACATACA
Thalassophryne amazonica genome assembly, chromosome: 8.
LR722973.1:10715918-10715934
TTGCGGCATGTCTGTGTCATGGACCGACGT10715918CGGAAAGAGGGAAGATGGCGAGAAACACGGTTTGAAAAAGTTTAATA
Rana temporaria genome assembly, chromosome: 1.
LR991680.1:143801129-143801145
TGTGCTGACGTAATGCTTTAAGTTATACTT143801129CGGAAAGAGGGAAGATGCACCCGAAAGATATTTCAGCGCCTGATGGG
Rana temporaria genome assembly, chromosome: 3.
LR991682.1:229191326-229191342
TGTACTGACGTAATGCCTTAAGCTCTACTT229191326CGGAAAGAGGGAAGATGCGCCCGAAGGGTATTTCAGTACCTGATAAA
Taurulus bubalis genome assembly, chromosome: 12.
OU342722.1:19481520-19481536
CAGGGAGACAATAGAAGGTTACTACGGACA19481520CGGAAAGAGGGAAGATGGAGGGCGTACCAGGTGAGGGGTTTACCAGA
Vipera ursinii genome assembly, chromosome: 1.
OX365964.1:121053376-121053392
AGAGGCCTGAATTTTGTTTATGGTCTGCCT121053376CGGAAAGAGGGAAGATGAGGCACTACTTTCCTATAGTTTGGGATAGG
Gobio gobio genome assembly, chromosome: 13.
OX442386.1:28322561-28322577
CCTCCTCACAGATCCACATATTAAGGTCAG28322561CGGAAAGAGGGAAGATGTGCGAGAGGCCAAAGAGAAAATAATGTCCG
Notothenia rossii genome assembly, chromosome: 4.
OX449114.1:17189620-17189636
TAGAGCGGGGGTGGTGCGGGGTGAGAGCAG17189620CGGAAAGAGGGAAGATGGACAGAAGCATGAATACAATGCACATAATT
Phalacrocorax aristotelis genome assembly, chromosome: 3.
OX451224.1:12882462-12882478
AAGCATAGAGACTAAAAGAAGACAGCAAAA12882462CGGAAAGAGGGAAGATGGAGTGCTTACCATTTAGTGCTATAACTAGC
Borostomias antarcticus genome assembly, chromosome: 23.
OX465226.1:96965-96981
ACCGGATCCTCTCAGCCGCCGGGGAGACTG96965CGGAAAGAGGGAAGATGCTGCGGCTCACAGACGTACAGTGTTGACCA
Raja brachyura genome assembly, chromosome: 9.
OY740789.1:35723048-35723064
GTTAACCAATTGTGGAGGGAACAGTCTCTG35723048CGGAAAGAGGGAAGATGGGAAGATGTGACGTGGTGGGATCCCGTTGG
Echiichthys vipera genome assembly, chromosome: 9.
OY829654.1:14196541-14196557
GTAGAGTGGGGGCGGTGCGGGTGAGAGGAG14196541CGGAAAGAGGGAAGATGGACACATGAATACAATACACATAAATATGA
Mobula hypostoma genome assembly, chromosome: 14.
OY992605.1:70392927-70392943
GAGGCAATAGCTGGTATACAGAGGTGAAGC70392927CGGAAAGAGGGAAGATGATGGACTGGTTAAATGAGGCAGCCTTTTTT
JGI_CAAL6381.fwd NIH_XGC_tropBrn4 Xenopus tropicalis cDNA clone IMAGE:7664726 5', mRNA sequence.
CX849549.1:104-120
ATCCTTCAACTCGACGCTGAGCCAAAAGGA104CGGAAAGAGGGAAGATGAGAATAATGAAGTGCTTATCATTCCCGAGG
TSA: Elaeis guineensis isotig03188.Elguifruit mRNA sequence.
JO090442.1:225-241
CTTTCTCAACCGATTCATCTTCATCACTGA225CGGAAAGAGGGAAGATGAAAAAATAGCCTCTATATCATCTATTGTCA
TSA: Taenia multiceps Unigene1961.Tamuadhe mRNA sequence.
JR918699.1:1351-1367
GCATCTTGCATTATGAAGCAAGAGGATCGT1351CGGAAAGAGGGAAGATGACGAAGTTTCCCATTTACCAAAATTTGGCC
Tetraodon nigroviridis genome survey sequence T7 end of clone 087F09 of library G from Tetraodon nigroviridis.
AL277982.1:73-89
CCCCTTCCTGTGAGAGAGAAGAAACGAGAG73CGGAAAGAGGGAAGATGAGAGGAGGAAGACTGACGTCCAGGCAGCTT
Pseudorca crassidens DNA, clone: QGB1-027E21, Forward sequence of BAC-end, genomic survey sequence.
DE665231.1:41-57
GTATAGAATAACTATTCAGATAATAGGTGG41CGGAAAGAGGGAAGATGGCAGAAGAGTAAGACGCGGAGATCAACTTC
CHO_OF4894xm12r1.ab1 CHO_OF4 Nicotiana tabacum genomic 3', genomic survey sequence.
FH422818.1:644-660
GAGACTGCTAGCCCCGATGTCAAGGAACCC644CGGAAAGAGGGAAGATGTTGCGGGATACAAGAAAGACGGTCATGAAG
Elaeis guineensis microsatellite DNA, clone pEgCIR0008.
AJ271625.1:13-29
CTTCATCACTGA13CGGAAAGAGGGAAGATGAAAAAATAGCCTGCAAAGCAATGGGGCAAT
Tricholoma matsutake DNA, chromosome 10, complete sequence.
AP026547.1:5943864-5943880
TGACGGATAGCGGGTAACTTGCCATGAGCG5943864CGGAAAGAGGGAAGATGCGGAGTGTGCCGGAAGGGGAAGCGGAGGAA
Aureobasidium melanogenum strain TN3-1 chromosome 11.
CP061990.1:1145288-1145304
TGTAAGGGATGGCGAAGTCACCATCGGCGA1145288CGGAAAGAGGGAAGATGGTACCACCAGGGGCCATGAGGGGGAGGTAG
Quercus dentata isolate Qdleaves-2020 chromosome 9.
CP116452.1:17085350-17085366
CGCAGAAATCATCTTGGCCAGTGCAACTCA17085350CGGAAAGAGGGAAGATGATCTATGGGACAGGCACTCGAGTGGAGGGT
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 2.
OX392557.1:5369909-5369925
GAGAGAAGATCTTTTGGAAATGCACTTAAA5369909CGGAAAGAGGGAAGATGTTTAGGAAACGGAGAGAGTAATACCATAAA
Beta vulgaris subsp. vulgaris genome assembly, chromosome: 5.
OX392560.1:47763353-47763369
GAGGAAAGATCTTTTGGAAACGCACTTAAA47763353CGGAAAGAGGGAAGATGTTTAGAAAACGGAGGGAGTATATTAGAGTC
Trifolium dubium genome assembly, chromosome: 6.
OX638067.1:4837902-4837918
ACGCCAAAATTGGTTCCGCTCACTTTTGGA4837902CGGAAAGAGGGAAGATGAACTAAAATTTCTGGCAAAAAGACTATAAT
Trifolium dubium genome assembly, chromosome: 9.
OX638070.1:14253392-14253408
ACTCCAAAATTGCTTCCGCTCACTTTTAGA14253392CGGAAAGAGGGAAGATGAACTAAAATTTATGGCAAAAGGACTATAAT
Trifolium dubium genome assembly, chromosome: 12.
OX638073.1:8993363-8993379
ACGCCAAAATTGGTTCCGCTCACTTTTGGA8993363CGGAAAGAGGGAAGATGAACTAAAATTTCTGACAAAAAGACTATAAT
Hordeum bulbosum genome assembly, chromosome: 3H_4.
OY737541.1:139732389-139732405
CATAAAGAGCAACAATGAGGCTCCATCCTC139732389CGGAAAGAGGGAAGATGCGATAACAAGGATTATAAGTCCATCAAGCA
Hordeum bulbosum genome assembly, chromosome: 3H_2.
OY737620.1:144040458-144040474
CATAAAGAGCAACAATGAGGCTTCATCCTC144040458CGGAAAGAGGGAAGATGCGATAACAAGGATTATAAGTCCATCAAGCA
Quercus cerris genome assembly, chromosome: 9.
OY770014.1:8740395-8740411
TACTAAGTATTTTTAACACACATACACTCA8740395CGGAAAGAGGGAAGATGATCTCCTTTTTATAAGACATGATTCTACGA
Triglochin maritima genome assembly, chromosome: 3.
OY821772.1:27170761-27170777
GTTCATCACTCTACTCTCCCTAGGGATCTA27170761CGGAAAGAGGGAAGATGGCTTACTATTGGTAGCACTGTATCTTCTAC
Alisma plantago-aquatica genome assembly, chromosome: 5.
OY856413.1:185891685-185891701
AGGGTAGGCAAGATGGAGAAGAAGATGATA185891685CGGAAAGAGGGAAGATGCTTACCAAAGAACAAGACCCACCTAGGGTT
Komagataeibacter europaeus strain SRCM101446 chromosome, complete genome.
CP021467.1:2294682-2294698
GCGCTATGTCCTGTAATAACGATGACAGAC2294682CGGAAAGAGGGAAGATGCACGGATCAATACCTGCGCTGGCCGCCTGC
Diabrotica virgifera virgifera genome assembly, chromosome: 4.
OU830627.1:172335564-172335580
AACGCGGCCAGGATGAGAGAGCAATAGCCA172335564CGGAAAGAGGGAAGATGATCGCCATCTTTCGTAAACAAACAAATTGA
Gari tellinella genome assembly, chromosome: 9.
OV277864.1:71686877-71686893
GAAGGAGGTGCCAATGTTATAGATATGAGA71686877CGGAAAGAGGGAAGATGAGTTGGATAGGGGATGAAAGAGAAAGAGAA
Platycnemis pennipes genome assembly, chromosome: 6.
OW121852.1:121650279-121650295
TGAGTCGGAAGGCGCTGAGCGAGAGAGCAG121650279CGGAAAGAGGGAAGATGGATATTGCTTCCCGACATTTTCCCACCCGT
Lumbricus rubellus genome assembly, chromosome: 15.
OX243825.1:7346663-7346679
TTACAACGGAAAGGGAGAACGGGGGAAGGG7346663CGGAAAGAGGGAAGATGCAGGAGAAATTAAATGTATGATGGTTAAGA
Meconema thalassinum genome assembly, chromosome: 11.
OX336399.1:179825003-179825019
GACCACTTTTCTTAAAGCGTTCATAATTGA179825003CGGAAAGAGGGAAGATGATCCACACGACACAACAAATATTTATTAAT
Meconema thalassinum genome assembly, chromosome: 11.
OX336399.1:179832767-179832783
GACCACTTTTCTTAAAGCGTTCATAATTGA179832767CGGAAAGAGGGAAGATGATCCACACGACACAACAAATATTTATTAAT
Sympetrum striolatum genome assembly, chromosome: 7.
OX388347.1:25762783-25762799
TAAAAATAAATCAGCGTTAAGTGCCTCTCG25762783CGGAAAGAGGGAAGATGGGTGGGAAAAGGGATTCTGTCGAAGGGGGG
Synanthedon tipuliformis genome assembly, chromosome: 16.
OX392423.1:9435164-9435180
AGTGATCAACAATAACGTAATGGAAGATAG9435164CGGAAAGAGGGAAGATGATAGAATACTACTGGTCCAAGTGTGTTCAG
Merodon equestris genome assembly, chromosome: 1.
OY284413.1:143551752-143551768
TAATTTCGTTTGCACGCTCTCGGCAAGATA143551752CGGAAAGAGGGAAGATGGATGCCACATGAATTAAAGGAAAGGAACAT
Merodon equestris genome assembly, chromosome: 5.
OY284417.1:1655143-1655159
TGTGTTGAGGGTTTATTGATTTTCACAAGC1655143CGGAAAGAGGGAAGATGATAAGGATGATGAGGCGCCTGAGATGGCGT
Galleria mellonella genome assembly, chromosome: 3.
OY292285.1:402800-402816
AGCTGTGGGGGGTGATGCACGAGAGTTTAT402800CGGAAAGAGGGAAGATGGTAATACAAAAGGTCGGCTGGACCATACCA
Ceriagrion tenellum genome assembly, chromosome: 10.
OY720642.1:132507200-132507216
GGTGGGTGGGTGGTTCGGTCCAGGAGGAGA132507200CGGAAAGAGGGAAGATGAAGTGGCGGTGAAGCCTCTTATTCGCTTCA
Pyrrhosoma nymphula genome assembly, chromosome: 4.
OY754330.1:129495879-129495895
CCCTGACAACCTGAATCTTCTACTGTGTGG129495879CGGAAAGAGGGAAGATGGGGCCTCTCATGATGTCGAATGGAAGACCA
Eupithecia inturbata genome assembly, chromosome: 6.
OY759182.1:7511225-7511241
AAGTGGAAATGGACTGGGCACTTGGCTAGA7511225CGGAAAGAGGGAAGATGGACTACCAGCCGTTACGGAATGGCAGCCCA
Patella ulyssiponensis genome assembly, chromosome: 5.
OY783229.1:14827771-14827787
GATCAAGCATCCCCTACGTCGACAACCGTT14827771CGGAAAGAGGGAAGATGAAATAAAGAAGATGATGGATAGGGGTATTA
Amblyjoppa proteus genome assembly, chromosome: 5.
OY998232.1:1234360-1234376
GAGAATTGGGCTTTGGGGCAGCGCGTGCAG1234360CGGAAAGAGGGAAGATGAGGCAGGATCATCGCATACATCGTCGAACC
Salticus scenicus genome assembly, chromosome: 4.
OZ005651.1:116998079-116998095
TATTTTGGAATGTTTAATTTTTAGGAGGGA116998079CGGAAAGAGGGAAGATGGTAAAGGGGCAAAAATCTAGAAAAGGAACA
Sepia lycidas genome assembly, chromosome: 43.
OZ010613.1:6881086-6881102
GAAGGAAGGAAGGAAGGACGGAAGGAGGGG6881086CGGAAAGAGGGAAGATGATGGAATGAAGGAAGGAAGAAAGGTGGGAG
Sepia lycidas genome assembly, chromosome: 43.
OZ010613.1:6881289-6881305
GAGGGGCGGAAGGAAGGAAGGAAGGAGGGG6881289CGGAAAGAGGGAAGATGATGGAATGAAGGAAGGAAGAAAGGTGGGAG
Maratus speciosus genome assembly, chromosome: 2.
OZ010788.1:240550453-240550469
TCGTACTTCTGTTACATATAAATTGTGCGA240550453CGGAAAGAGGGAAGATGCTTTTACACTTTTTAATTAGCTAAAGTAAG
Tembusu virus isolate SDXT, complete genome.
KJ740745.1:10186-10202
AGTGACTTCATGGAACGAAGTGCCATACCT10186CGGAAAGAGGGAAGATGGCTGGTGTGGTAGTCTGATTGGACATCGAG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGAAAGAGGGAAGATG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGAAAGAGGGAAGATG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.586 | 0.577 | search_plus_done; http://172.18.8.135:50400/match?q=CGGAAAGAGGGAAGATG&k=0&no_gap=0&offset=0&limit=50
0.736 | 0.150 | search_minus_done; http://172.18.8.135:50400/match?q=CATCTTCCCTCTTTCCG&k=0&no_gap=0&offset=0&limit=0
0.736 | 0.000 | cgi_end;

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