GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-20 11:44:25, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Carassius carassius genome assembly, chromosome: 14.
OY720481.1:14066559-14066578
AGAGAGAGAGAGATGTAGAAGAGTTTCTCT14066559CGGAATGAACCAATCAATAGCAGAATGTTATTCGTAATGGACTGTGTCAG
Lotus japonicus genomic DNA, chromosome 2, clone: LjT27K02, TM0225.
AP006129.1:28915-28934
ATATATATATATATTAAGTAAATATGCAAA28915CGGAATGAACCAATCAATAGCTACTTAGTTACTTACTATAATAGGCGGGT
Lotus japonicus genomic DNA, chromosome 2, clone: LjT06K23, TM0391.
AP006692.2:71998-72017
ATATATATATATATTAAGTAAATATGCAAA71998CGGAATGAACCAATCAATAGCTACTTAGTTACTTACTATAATAGGCGGGT
Lithophane leautieri genome assembly, chromosome: 18.
OX424476.1:12876218-12876237
TGTATGAGCCAAAATAAAATTTAAATAAGC12876218CGGAATGAACCAATCAATAGGCTGGGTGCGGGAGGGAGATCACGGGTTGC
Lotus japonicus B-129 DNA, chromosome 2, complete sequence.
AP022630.1:72257399-72257418
ACCCGCCTATTATAGTAAGTAACTAAGTAG72257399CTATTGATTGGTTCATTCCGTTTGCATATTTACTTAATATATATATATAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGAATGAACCAATCAATAG
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGAATGAACCAATCAATAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.113 | 0.104 | search_plus_done; http://172.18.8.135:50400/match?q=CGGAATGAACCAATCAATAG&k=0&no_gap=0&offset=0&limit=50
0.140 | 0.028 | search_minus_done; http://172.18.8.135:50400/match?q=CTATTGATTGGTTCATTCCG&k=0&no_gap=0&offset=0&limit=46
0.141 | 0.001 | cgi_end;

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