GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 05:11:43, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Brassica oleracea var. botrytis putative G-protein-coupled transmembrane receptor mRNA, complete cds.
AF227978.1:1171-1190
TACATCCATCACAGATTCACCTAGTTTCTT1171CGGAGAACTTCGAAGATGTCGGAGCTAGAGCTGTTCATGCTCGTTCCACC
Brassica oleracea HDEM genome, scaffold: C3.
LR031872.1:9307874-9307893
TACATCCATCACAGATTCACCTAGTTTCTT9307874CGGAGAACTTCGAAGATGTCGGAGCTAGAGCTGTTCATGCTCGTTCCACC
Xestia xanthographa genome assembly, chromosome: 19.
LR990660.1:2715747-2715766
TCGTTTGGTCAAACTTTATTAAAATCGATC2715747CGGAGAACTTCGAAGATGTCGCAGACTGGTAAGGTCTCTGAAGTATTTAG
BONJR01TR BO_1.6_2_KB_tot Brassica oleracea genomic clone BONJR01, genomic survey sequence.
BZ442119.1:519-538
GGTGGAACGAGCATGAACAGCTCTAGCTCC519GACATCTTCGAAGTTCTCCGAAGAAACTAGGTGAATCTGTGATGGATGTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGAGAACTTCGAAGATGTC
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGAGAACTTCGAAGATGTC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.105 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=CGGAGAACTTCGAAGATGTC&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.020 | search_minus_done; http://172.18.8.135:50400/match?q=GACATCTTCGAAGTTCTCCG&k=0&no_gap=0&offset=0&limit=47
0.126 | 0.001 | cgi_end;

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