GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-07 15:42:50, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Coregonus sp. 'balchen' genome assembly, chromosome: 12.
LR778264.1:41155508-41155527
TGGAAAGTTGTTAGGTCAGTGGAGGAGTGG41155508CGGAGAGAGTTATGGGCAAATTCTGCCCATGGCAAGAACACTGACCACTC
Arachis hypogaea cultivar Shitouqi chromosome B09.
CP031001.1:52729773-52729792
TGGCCACAAACGGTTCGTCAATCATAGCTC52729773CGGAGAGAGTTATGGGCAAAAAAAGGAGAAGATGAATAGTGAAAATTGCT
Arachis ipaensis cultivar K30076 chromosome 09.
CP049900.1:53729320-53729339
TGGCCACAAACGGTTCGTCAATCATAGCTC53729320CGGAGAGAGTTATGGGCAAAAAAAGGAGAAGATGAATAGTGAAAATTGCT
Triticum aestivum genome assembly, chromosome: 2B.
LR865462.1:627451561-627451580
GGGGAAGAGCTCCGAGACGACATAGTGGTG627451561CGGAGAGAGTTATGGGCAAAGAGCCAAGGAATTTGTGTGCGTACGATGAG
Arachis hypogaea DNA, clone: AHGS46F12.
DH961652.1:411-430
AGCAATTTTCACTATTCATCTTCTCCTTTT411TTTGCCCATAACTCTCTCCGGAGCTATGATTGACGAACCGTTTGTGGCCA
Triticum aestivum genome assembly, chromosome: 2B.
LR862512.1:625012969-625012988
CTCATCGTACGCACACAAATTCCTTGGCTC625012969TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LR862554.1:629737460-629737479
CTCATCGTACGCACACAAATTCCTTGGCTC629737460TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LR865483.1:621956095-621956114
CTCATCGTACGCACACAAATTCCTTGGCTC621956095TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LR865504.1:627215437-627215456
CTCATCGTACGCACACAAATTCCTTGGCTC627215437TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LR865743.1:628484017-628484036
CTCATCGTACGCACACAAATTCCTTGGCTC628484017TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LR865764.1:625044041-625044060
CTCATCGTACGCACACAAATTCCTTGGCTC625044041TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LR877313.1:622991123-622991142
CTCATCGTACGCACACAAATTCCTTGGCTC622991123TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LR878439.1:628514020-628514039
CTCATCGTACGCACACAAATTCCTTGGCTC628514020TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
LS992084.1:625115236-625115255
CTCATCGTACGCACACAAATTCCTTGGCTC625115236TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum turgidum subsp. durum genome assembly, chromosome: 2B.
LT934114.1:613468273-613468292
CTCATCGTACGCACACAAATTCCTTGGCTC613468273TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
OU015725.1:629648744-629648763
CTCATCGTACGCACACAAATTCCTTGGCTC629648744TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
OU343177.1:640626970-640626989
CTCATCGTACGCACACAAATTCCTTGGCTC640626970TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
OU963876.1:620684438-620684457
CTCATCGTACGCACACAAATTCCTTGGCTC620684438TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
OV100741.1:631409209-631409228
CTCATCGTACGCACACAAATTCCTTGGCTC631409209TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
OW530314.1:631409209-631409228
CTCATCGTACGCACACAAATTCCTTGGCTC631409209TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC
Triticum aestivum genome assembly, chromosome: 2B.
OX637229.1:549930913-549930932
CTCATCGTACGCACACAAATTCCTTGGCTC549930913TTTGCCCATAACTCTCTCCGCACCACTATGTCGTCTCGGAGCTCTTCCCC

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGAGAGAGTTATGGGCAAA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGAGAGAGTTATGGGCAAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.099 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=CGGAGAGAGTTATGGGCAAA&k=0&no_gap=0&offset=0&limit=50
0.142 | 0.043 | search_minus_done; http://172.18.8.135:50400/match?q=TTTGCCCATAACTCTCTCCG&k=0&no_gap=0&offset=0&limit=46
0.153 | 0.011 | cgi_end;

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