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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 16:05:54, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Lasioglossum lativentre genome assembly, chromosome: 9.
OU744363.1:8550516-8550535
ACGGGAGCGTGCTGGAAGGAGAGGGAAAAA8550516CGGAGAGGAAAGAGCAGAGAGCCGGGGCCGCGTGTAGTTTCTTTTTCGCA
Limnephilus marmoratus genome assembly, chromosome: 23.
OU862929.1:9424278-9424297
ATGAATGCTAACTTACTCACGCTTTTTACC9424278CGGAGAGGAAAGAGCAGAGAGTGGATCTCCACATAACCATGTCCTGTCAC
Tiphia femorata genome assembly, chromosome: 6.
OX090900.1:15700264-15700283
CCTTCGGACGACGAAAGAATTGATCAGTCT15700264CGGAGAGGAAAGAGCAGAGAGATACTTCATTTTTTGTTGAGAAAGAGAGA
Coelopa pilipes genome assembly, chromosome: 4.
OX376699.1:27814905-27814924
GAAGAGGCAGAGCAATGAAAATCCCGAGGG27814905CGGAGAGGAAAGAGCAGAGAGGAAGGAGACGCACGACGCCAAAATATCAG
Conger conger genome assembly, chromosome: 11.
OY741324.1:49207257-49207276
CGCTCGGCTCTCAAAGCCTCACGTCTCCAG49207257TCTCTGCTCTTTCCTCTCCGTTAAGTCTTAACTTTTGACCTCTGACCTCT
so80d11.y1 Gm-c1040 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1040-1966 5', mRNA sequence.
BE330577.1:176-195
GAAAGAGAGAGCCCGATCTTCCTCTATCGA176TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
ss57b10.y1 Gm-c1062 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1062-500 5', mRNA sequence.
BE806316.1:90-109
GAAAGAGAGAGCCCGATCTTCCTCTATCGA90TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
sal21e07.y1 Gm-c1059 Glycine soja cDNA clone SOYBEAN CLONE ID: Gm-c1059-2894 5' similar to TR:Q9SG69 Q9SG69 PUTATIVE RING ZINC FINGER PROTEIN, mRNA sequence.
BM525244.1:156-175
GAAAGAGAGAGCCCGATCTTCCTCTATCGA156TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
GLLC760TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence.
FG987566.1:81-100
GAAAGAGAGAGCCCGATCTTCCTCTATCGA81TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
CCCC5125.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC5125 5', mRNA sequence.
GR831250.1:169-188
GAAAGAGAGAGCCCGATCTTCCTCTATCGA169TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
CCCC9135.b1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC9135 5', mRNA sequence.
GR837587.1:240-259
GAAAGAGAGAGCCCGATCTTCCTCTATCGA240TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
ocpsga0_0020_D07.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO009996.1:57-76
GAAAGAGAGAGCCCGATCTTCCTCTATCGA57TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
ocpsga0_0073_D11.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDNA, mRNA sequence.
HO014277.1:53-72
GAAAGAGAGAGCCCGATCTTCCTCTATCGA53TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
Soybean clone JCVI-FLGm-18I1 unknown mRNA.
BT090425.1:81-100
GAAAGAGAGAGCCCGATCTTCCTCTATCGA81TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
Glycine max cultivar Williams 82 chromosome 2.
CP126427.1:11060694-11060713
GAAAGAGAGAGCCCGATCTTCCTCTATCGA11060694TCTCTGCTCTTTCCTCTCCGCTTTCCAGATTCGCCGCATTTTGCAATTCC
Ophion costatus genome assembly, chromosome: 4.
OX632359.1:38314460-38314479
GAAAACGGGCTATCGATTTTGTCAATCCAA38314460TCTCTGCTCTTTCCTCTCCGGGCGGTCGATTCACTATAACTGTACACATC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGAGAGGAAAGAGCAGAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGAGAGGAAAGAGCAGAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.244 | 0.235 | search_plus_done; http://172.18.8.135:50400/match?q=CGGAGAGGAAAGAGCAGAGA&k=0&no_gap=0&offset=0&limit=50
0.845 | 0.601 | search_minus_done; http://172.18.8.135:50400/match?q=TCTCTGCTCTTTCCTCTCCG&k=0&no_gap=0&offset=0&limit=46
0.852 | 0.008 | cgi_end;

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