GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 19:30:28, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Melanargia galathea genome assembly, chromosome: 5.
OV049859.1:745465-745484
GTATGCATATCGAGCCGGCGATATCATGCG745465CGGCCTTTCAATCAAATGTTATGGTTTCATCGGCTATGCGAGCTAAAGGT
Elmis aenea genome assembly, chromosome: 3.
OX393578.1:4671330-4671349
ATTCACAAATAACAGCTGCGTTAGATCAAG4671330CGGCCTTTCAATCAAATGTTTTCCGATAAAAACTTGGAACCCAGGACCAG
Daucus carota subsp. sativus cultivar DH1 chromosome 7.
CP093349.1:39134079-39134098
AAAATTAATACTTTCTAAATATACATTATC39134079AACATTTGATTGAAAGGCCGGTTTGTTTGTTTACTCAAAGTTTGAAACTA
Daucus carota isolate Kuroda chromosome 7.
CP125307.1:39206092-39206111
AAATTAATACTTTTTTTAATATGCATTATC39206092AACATTTGATTGAAAGGCCGGTTTGTTTGTTTACTCAAAGTTTGAAACTA
Udea ferrugalis genome assembly, chromosome: 20.
OX465535.1:2654724-2654743
ACTTTACTTTCAGGCTACTAACGCACACAA2654724AACATTTGATTGAAAGGCCGAGTATAATACTCAAGTATATTCCTTCAAGA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGCCTTTCAATCAAATGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGCCTTTCAATCAAATGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.110 | 0.101 | search_plus_done; http://172.18.8.135:50400/match?q=CGGCCTTTCAATCAAATGTT&k=0&no_gap=0&offset=0&limit=50
0.129 | 0.018 | search_minus_done; http://172.18.8.135:50400/match?q=AACATTTGATTGAAAGGCCG&k=0&no_gap=0&offset=0&limit=48
0.131 | 0.002 | cgi_end;

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