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データベース：
 

ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-03-14 19:22:52, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

RS2AO09TFB RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EW724429.1:347-368
TCCAGTGCTTCCCGCTTCAGCAGGGTATGG347CGGCTTCACGTAAAGAGACAGAGGAAGTCATATTCGGAGCGCTTGACAATCT
RR4BY07TF RR4(PB) Raphanus raphanistrum subsp. landra cDNA 5', mRNA sequence.
EX770986.1:447-468
TCCAGTGCTCCCCGCTTCAGCAGGGTATGG447CGGCTTCACGTAAAGAGACAGAGGAAGTCATATTCGGAGCGCTTGACAATCT
RS2C753TF RS2(RS) Raphanus sativus cDNA 5', mRNA sequence.
EX896523.1:123-144
TCCAGTGCTTCCCGCTTCAGCAGGGTATGG123CGGCTTCACGTAAAGAGACAGAGGAAGTCATATTCGGAGCGCTTGACAATCT
TSA: Raphanus sativus RS18189 mRNA sequence.
JT802736.1:438-459
TCCAGTGCTTCCCGCTTCAGCAGGGTATGG438CGGCTTCACGTAAAGAGACAGAGGAAGTCATATTCGGAGCGCTTGACAATCT
Barbarea vulgaris genome assembly, chromosome: 7.
OY763893.1:21150498-21150519
TTACTTGCTTTCCCCTTAAGCAAGACATGG21150498CGGCTTCACGTAAAGAGACAGAACAAGTAATATTCGGAGCTCTTGATAATCT
Cardamine chenopodiifolia genome assembly, chromosome: 19.
OZ000477.1:16067781-16067802
TTCAGTGCTTCCCTCTTCAGCAAGACATGG16067781CGGCTTCACGTAAAGAGACAGAACAAGTAATATTCGGAGCTCTTGACAATCT
Xanthogramma pedissequum genome assembly, chromosome: 4.
OU343163.1:71068564-71068585
TGTAGCAGCCTAGGGCCTCCGCTAAATGTT71068564CGGCTTCACGTAAAGAGACAGAACATTCCACGTGCAAATCCGAAGTTCGTTG
TSA: Raphanus sativus var. sativus RNA, contig: WG3_3799.
FX658946.1:983-1004
AGATTGTCAAGCGCTCCGAATATGACTTCC983TCTGTCTCTTTACGTGAAGCCGCCATACCCTGCTGAAGCGGGAAGCACTGGA
Raphanus sativus genome assembly, chromosome: 1.
LR778310.1:27833559-27833580
AGATTGTCAAGCGCTCCGAATATGACTTCC27833559TCTGTCTCTTTACGTGAAGCCGCCATACCCTGCTGAAGCGGGAAGCACTGGA
Raphanus sativus genome assembly, chromosome: 6.
OY743212.1:27833559-27833580
AGATTGTCAAGCGCTCCGAATATGACTTCC27833559TCTGTCTCTTTACGTGAAGCCGCCATACCCTGCTGAAGCGGGAAGCACTGGA
Nasturtium officinale genome assembly, chromosome: 10.
OY978508.1:1876706-1876727
AGATTATCAGTAGCTCCGAATATTACTTGT1876706TCTGTCTCTTTACGTGAAGCCGCCATGTCTTGCTGAAGGGGAAAGCATGTAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGCTTCACGTAAAGAGACAGA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGCTTCACGTAAAGAGACAGA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.446 | 0.438 | search_plus_done; http://172.18.8.135:50400/match?q=CGGCTTCACGTAAAGAGACAGA&k=0&no_gap=0&offset=0&limit=50
0.574 | 0.127 | search_minus_done; http://172.18.8.135:50400/match?q=TCTGTCTCTTTACGTGAAGCCG&k=0&no_gap=0&offset=0&limit=43
0.577 | 0.003 | cgi_end;

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