GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-04 23:28:33, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

TSA: Acropora millepora Cluster014658.Acmimixed mRNA sequence.
JR974085.1:255-274
GAGAGACACACGGTCGCTTTTTTAGGATGG255CGGGATCAAAAGAACAAGGAGAATCACAGATCACGCGGTTATTCGCCAAA
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:58657990-58658009
GCCTAGGCCACAATGAGTCTTTATTGGAGA58657990CGGGATCAAAAGAACAAGGATACTTGGCCAATAAAATTCTTTCTAGTAAT
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:58742118-58742137
GCCTAGGCCACAATGAGTCTTTATTGGAGA58742118CGGGATCAAAAGAACAAGGATACTTGGCCAATAAAATTCTTTCGAGTAAT
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:58859796-58859815
GCCTAGGCCACAACAAGTCTTTATTGGAGA58859796CGGGATCAAAAGAACAAGGATTCTTGGCCAACAAAATTCTTTTGAGTAGT
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:58936779-58936798
GCCTAGGCCACAATGAGTCTTTATTGGAGA58936779CGGGATCAAAAGAACAAGGATACTTGGCCAATAAAATTCTTTCGAGTAAT
Sympetrum striolatum genome assembly, chromosome: 10.
OX388350.1:59034182-59034201
GCCTAGGCCACAACAAGTCTTTATTGGAGA59034182CGGGATCAAAAGAACAAGGATTCTTGGCCAATAAAATTCTTTTGAGTAGT
Phaonia tiefii genome assembly, chromosome: 4.
OZ008370.1:199511948-199511967
GAAACTATAATTTGCTTGCTACTCAAAGTG199511948CGGGATCAAAAGAACAAGGATTAACTACCTTAAATTTTCCACTGGTTTTT
Cinclus cinclus genome assembly, chromosome: 3.
OY759679.1:57422685-57422704
GTGATGATTCCTCAGTGTTTCTTTGACTAC57422685TCCTTGTTCTTTTGATCCCGTCTCCCTGTCAAATCTGAATCTGTGTGTGG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2689475-2689494
TTATTCACTTGCTAGAGGCTTGTGGAGTAG2689475TCCTTGTTCTTTTGATCCCGTTTGTAAAGTTTTTTATTCTTGCAAATTTC
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2689207-2689226
TTATTCACTTGCTAGAGGCTTGTGGAGTAG2689207TCCTTGTTCTTTTGATCCCGTTTGTAAAGTTTTTTATTCTTGCAAATTTC
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2794740-2794759
TTATTCACTTGCTAGAGGCTTGTGGAGTAG2794740TCCTTGTTCTTTTGATCCCGTTTGTAAAGTTTTTTATTCTTGCAAATTTC
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2862171-2862190
TTATTCACTTGCTAGAGGCTTGTGGAGTAG2862171TCCTTGTTCTTTTGATCCCGTTTGTAAAGTTTTTTATTCTTGCAAATTTC
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2902128-2902147
TTATTCACTTGCTAGAGGCTTGTGGAGTAG2902128TCCTTGTTCTTTTGATCCCGTTTGTAAAGTTTTTTATTCTTGCAAATTTC
Vicia faba genome assembly, chromosome: 3.
OX451738.1:843694760-843694779
AAAACTTCCTTTGCCTCTAGAAGATAACTT843694760TCCTTGTTCTTTTGATCCCGGATGATAGCCTAATCCAAACTTAGCAAATT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGGATCAAAAGAACAAGGA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGGATCAAAAGAACAAGGA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.106 | 0.097 | search_plus_done; http://172.18.8.135:50400/match?q=CGGGATCAAAAGAACAAGGA&k=0&no_gap=0&offset=0&limit=50
0.133 | 0.027 | search_minus_done; http://172.18.8.135:50400/match?q=TCCTTGTTCTTTTGATCCCG&k=0&no_gap=0&offset=0&limit=43
0.137 | 0.004 | cgi_end;

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