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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 12:40:04, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

CGN-43672 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w20a20 5', mRNA sequence.
DV698091.1:501-520
AGCTGGAGTCGGTACAAGGTAATCAGGCAG501CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT
CC-L01_023_F05 Coffea young leaves Coffea canephora cDNA clone CC-L01_023_F05, mRNA sequence.
EE193462.1:12-31
TAATCAGGCAG12CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT
CA00-XX-SI3-023-A04-EM.F Coffea arabica SI3 Coffea arabica cDNA clone CA00-XX-SI3-023-A04-EM, mRNA sequence.
GW433412.1:226-245
AGCTGGAGTCGGTGCAAGGTAATCAGGCAG226CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT
CA00-XX-RX1-028-C07-EB.F Coffea arabica RX1 Coffea arabica cDNA clone CA00-XX-RX1-028-C07-EB, mRNA sequence.
GW443200.1:119-138
AGCTGGAGTCGGTGCAAGGTAATCAGGCAG119CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT
CA00-XX-BP1-026-F01-BM.F Coffea arabica BP1 Coffea arabica cDNA clone CA00-XX-BP1-026-F01-BM, mRNA sequence.
GW454387.1:227-246
AGCTGGAGTCGGTGCAAGGTAATCAGGCAG227CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT
CA00-XX-FB1-096-H08-BF.F Coffea arabica FB1 Coffea arabica cDNA clone CA00-XX-FB1-096-H08-BF, mRNA sequence.
GW481766.1:94-113
AGCTGGAGTCGGTGCATTGTAACCAGGCAG94CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT
CA00-XX-FR1-001-A07-MC.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-001-A07-MC, mRNA sequence.
GW487100.1:227-246
AGCTGGAGTCGGTGCAAGGTAATCAGGCAG227CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT
CA00-XX-FR1-008-D02-BG.F Coffea arabica FR1 Coffea arabica cDNA clone CA00-XX-FR1-008-D02-BG, mRNA sequence.
GW487535.1:227-246
AGCTGGAGTCGGTGCAAGGTAATCAGGCAG227CGGGCGGAAACGGTCAGATCCGATACCGGTCTCCATCGGCCGCGGAGCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGGCGGAAACGGTCAGATC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGGCGGAAACGGTCAGATC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.831 | 0.822 | search_plus_done; http://172.18.8.135:50400/match?q=CGGGCGGAAACGGTCAGATC&k=0&no_gap=0&offset=0&limit=50
0.930 | 0.099 | search_minus_done; http://172.18.8.135:50400/match?q=GATCTGACCGTTTCCGCCCG&k=0&no_gap=0&offset=0&limit=42
0.930 | 0.000 | cgi_end;

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