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ミスマッチ/ギャップを許容 ミスマッチのみ許容 : 塩基まで (検索する配列長の25%まで)
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2025-04-11 23:19:20, GGGenome : DDBJ release 134.0 (Mar, 2024)

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Results:

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UCRCS01_02bd09_b1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bd09, mRNA sequence.
CB291091.1:728-749
ATCACAACACTAGCAGTTCCATCACCAGCA728CGGTCATTGAAGAGTGCTCCCCAACCTGGAATGTCATCTGTTATTGATCTTG
UCRCS01_02bd09_g1 Washington Navel orange cold acclimated flavedo & albedo cDNA library Citrus sinensis cDNA clone UCRCS01_02bd09, mRNA sequence.
CB291092.1:729-750
ATCACAACACTAGCAGTTCCATCACCAGCA729CGGTCATTGAAGAGTGCTCCCCAACCTGGAATGTCATCTGTTATTGATCTTG
UCRCS05_0003K05_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0003K05, mRNA sequence.
CN186919.1:765-786
ATCACAACACTAGCAGTTCCATCACCAGCA765CGGTCATTGAAGAGTGCTCCCCAACCTGGAATGTCA
UCRCS06_0005K11_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0005K11, mRNA sequence.
CN191691.1:737-758
ATCACAACACTAGCAGTTCCATCACCAGCA737CGGTCATTGAAGAGTGCTCCCCAACCTGAAATGTCATCTGTTATTGATCTTG
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:31676686-31676707
GTACTCACACTAGCAGTTCCATCACCAGCA31676686CGGTCATTGAAGAGTGCTCCCCAACCTGGAATGTCATCTGTTATTGATCTTG
USDA-FP_124000-490 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-73_B07 5', mRNA sequence.
CF508987.1:315-336
CAAGATCAATAACAGATGACATTCCAGGTT315GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
USDA-FP_124000-658 Immature Ovaries from field-collected Valencia Sweet Orange (Citrus sinensis (L.) Osbeck) Citrus sinensis cDNA clone MVF-75_A04 5', mRNA sequence.
CF509153.1:508-529
CAAGATCAATAACAGATGACATTCCAGGTT508GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTG
UCRPT01_0008K13_r Poncirus trifoliata CTV-challenged cDNA library - AGI2 Citrus trifoliata cDNA clone PT_6Ea0008K13, mRNA sequence.
CV706650.1:398-419
CAAGATCAATAACAGATGACATTCCAGGTT398GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
C01019C09SK Veg1 Citrus clementina cDNA clone C01019C09, mRNA sequence.
CX288333.1:215-236
CAAGATCAATAACAGATGACATTCCAGGTT215GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTGAGTAC
C03001C09Rv OF1 Citrus clementina cDNA clone C03001C09, mRNA sequence.
CX290884.1:36-57
CAAGATCAATAACAGATGACATTCCAGGTT36GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
C04011A10SK FlavFr1 Citrus clementina cDNA clone C04011A10, mRNA sequence.
CX292145.1:164-185
CAAGATCAATAACAGATGACATTCCAGGTT164GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
C05068A07SK DroRLeaf1 Citrus clementina cDNA clone C05068A07, mRNA sequence.
CX295048.1:53-74
CAAGATCAATAACAGATGACATTCCAGGTT53GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTGAGTAC
wca01a02 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca01a02 5', mRNA sequence.
DN134763.1:117-138
CAAGATCAATAACAGATGACATTCCAGGTT117GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
wca03c12 Developing fruit albedo at 80 DAFB in Vulnus5 vector Citrus sinensis cDNA clone wca03c12 5', mRNA sequence.
DN134921.1:111-132
CAAGATCAATAACAGATGACATTCCAGGTT111GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
USDA-FP/ARO_12451 Star Ruby grapefruit temperature-conditioned flavedo cDNA Citrus x paradisi cDNA clone Cond-18_B01 5', mRNA sequence.
DN797583.1:33-54
CAAGATCAATAACAGATGACATTCCAGGTT33GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
USDA-FP/ARO_16058 Star Ruby grapefruit hot water-treated flavedo Citrus x paradisi cDNA clone Hw-37_A08 5', mRNA sequence.
DN960228.1:670-691
CAAGATCAATAACAGATGACATTCCAGGTT670GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
USDA-FP_16595 Citrus sinensis phloem Citrus sinensis cDNA clone VPE-15_B08 5', mRNA sequence.
DR908467.1:81-102
CAAGATCAATAACAGATGACATTCCAGGTT81GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C1-101-053-D12-CT.F Sweet orange leaf, infected with Xylella fastidiosa (stage 1 of 2) Citrus sinensis cDNA, mRNA sequence.
EY663278.1:260-281
CAAGATCAATAACAGATGACATTCCAGGTT260GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C3-700-075-H05-CT.F Sweet orange fruit, development stadium (1 of 6) Citrus sinensis cDNA, mRNA sequence.
EY698787.1:128-149
CAAGATCAATAACAGATGACATTCCAGGTT128GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C3-704-049-F12-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY731915.1:81-102
CAAGATCAATAACAGATGACATTCCAGGTT81GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C3-704-060-A05-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY732306.1:81-102
CAAGATCAATAACAGATGACATTCCAGGTT81GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C3-704-062-A04-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY732434.1:81-102
CAAGATCAATAACAGATGACATTCCAGGTT81GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C3-704-062-A08-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY732437.1:81-102
CAAGATCAATAACAGATGACATTCCAGGTT81GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C3-704-062-B09-CT.F Sweet orange fruit, development stadium (5 of 6) Citrus sinensis cDNA, mRNA sequence.
EY732448.1:81-102
CAAGATCAATAACAGATGACATTCCAGGTT81GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS00-C3-705-013-H09-CT.F Sweet orange fruit, development stadium (6 of 6) Citrus sinensis cDNA, mRNA sequence.
EY736257.1:397-418
CAAGATCAATAACAGATGACATTCCAGGTT397GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CS12-C1-001-026-E02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
EY755296.1:66-87
CAAGATCAATAACAGATGACATTCCAGGTT66GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CR05-C3-700-081-B12-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY787031.1:346-367
CAAGATCAATAACAGATGACATTCCAGGTT346GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CR05-C3-702-070-F07-CT.F Mandarin fruit, development stadium (3 of 3) Citrus reticulata cDNA, mRNA sequence.
EY806912.1:225-246
CAAGATCAATAACAGATGACATTCCAGGTT225GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CG32-C1-003-036-C06-CT.F Mexican lime leaf, greenhouse plant Citrus aurantiifolia cDNA, mRNA sequence.
EY853765.1:382-403
CAAGATCAATAACAGATGACATTCCAGGCT382GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CG32-C1-003-036-G05-CT.F Mexican lime leaf, greenhouse plant Citrus aurantiifolia cDNA, mRNA sequence.
EY853810.1:459-480
CAAGATCAATAACAGATGACATTCCAGGCT459GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CG32-C1-003-059-E04-CT.F Mexican lime leaf, greenhouse plant Citrus aurantiifolia cDNA, mRNA sequence.
EY855853.1:371-392
CAAGATCAATAACAGATGACATTCCAGGCT371GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
CM30-C1-401-029-C11-CT.F Sweet lime leaf, infected with CiLV Citrus limettioides cDNA, mRNA sequence.
EY860840.1:25-46
CAATAACAGATGACATCCCTTGTT25GGGGAGCACTCTTCAATGACCGTGCTGGTGATCCAACTGCTAGTGTTGTGAT
CL06-C4-501-049-A12-CT.F Rangpur lime root, plant with hydric stress Citrus limonia cDNA, mRNA sequence.
EY876265.1:443-464
CAAGATCAATAACAGATGACATTCCAGGTT443GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
C32004F07EF DevOvary1 Citrus clementina cDNA clone C32004F07, mRNA sequence.
FC876427.1:559-580
CAAGATCAATAACAGATGACATTCCAGGTT559GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT
Citrus sinensis vacuolar citrate/H+ symporter mRNA, complete cds.
EF028327.1:1063-1084
CAAGATCAATAACAGATGACATTCCAGGTT1063GGGGAGCACTCTTCAATGACCGTGCTGGTGATGGAACTGCTAGTGTTGTGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGTCATTGAAGAGTGCTCCCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGTCATTGAAGAGTGCTCCCC | format : html | download : | debug :

0.009 | 0.009 | search_start;
0.453 | 0.444 | search_plus_done; http://172.18.8.135:50400/match?q=CGGTCATTGAAGAGTGCTCCCC&k=0&no_gap=0&offset=0&limit=50
2.070 | 1.616 | search_minus_done; http://172.18.8.135:50400/match?q=GGGGAGCACTCTTCAATGACCG&k=0&no_gap=0&offset=0&limit=45
2.090 | 0.020 | cgi_end;

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