GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-05 21:23:32, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Dianthus caryophyllus mRNA, clone: CFES14_F03, 5' end sequence.
FY399202.1:573-592
TGCCGGTGCCGGTGCCGGAAGTAGGGTTGC573CGGTGCCTGATACTGGAGTTACTGGCATGATTCCACCGCCACCTCCGCCG
Dianthus caryophyllus mRNA, clone: CES05K16, 5' end sequence.
FY384237.1:329-348
CGGCGGAGGTGGCGGTGGAATCATGCCAGT329AACTCCAGTATCAGGCACCGGCAACCCTACTTCCGGCACCGGCACCGGCA
Dianthus caryophyllus mRNA, clone: CFES02A07, 5' end sequence.
FY394553.1:522-541
CGGCGGAGGTGGCGGTGGAATCATGCCAGT522AACTCCAGTATCAGGCACCGGCAACCCTACTTCCGGCACCGGCACCGGCA
Dianthus caryophyllus mRNA, clone: CFES02A19, 5' end sequence.
FY394565.1:522-541
CGGCGGAGGTGGCGGTGGAATCATGCCAGT522AACTCCAGTATCAGGCACCGGCAACCCTACTTCCGGCACCGGCACCGGCA
Dianthus caryophyllus mRNA, clone: CFES03P09, 5' end sequence.
FY395292.1:630-649
CGGCGGAGGTGGCGGTGGAATCATGCCAGT630AACTCCAGTATCAGGCACCGGCAACCCTACTTCCGGCACCGGCACCGGCA
Dianthus caryophyllus mRNA, clone: CFES06N08, 5' end sequence.
FY396378.1:371-390
CGGCGGAGGTGGCGGTGGAATCATGCCAGT371AACTCCAGTATCAGGCACCGGCAACCCTACTTCCGGCACCGGCACCGGCA
Dianthus caryophyllus mRNA, clone: CFES21P23, 5' end sequence.
FY402065.1:659-678
CGGCGGAGGTGGCGGTGGAATCATGCCAGT659AACTCCAGTATCAGGCACCGGCAACCCTACTTCCGGCACCGGCACCGGCA
Chalcosyrphus nemorum genome assembly, chromosome: 1.
OX454332.1:68898623-68898642
ACTGCCGTGATGAGGAAATAATTCTCCACT68898623AACTCCAGTATCAGGCACCGAAACGTATTGAGCTGCCATATAAAAAAAGG
Dasypolia templi genome assembly, chromosome: 7.
OY743143.1:8642040-8642059
AGTGCAGGCCCTCGAAGCTATTGGAATGTA8642040AACTCCAGTATCAGGCACCGGAACGCGTTCTGAAACAATAGATAAAATAT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGGTGCCTGATACTGGAGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGTGCCTGATACTGGAGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.181 | 0.172 | search_plus_done; http://172.18.8.135:50400/match?q=CGGTGCCTGATACTGGAGTT&k=0&no_gap=0&offset=0&limit=50
0.620 | 0.439 | search_minus_done; http://172.18.8.135:50400/match?q=AACTCCAGTATCAGGCACCG&k=0&no_gap=0&offset=0&limit=49
0.625 | 0.005 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).