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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-12 04:47:01, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Brassica rapa subsp. pekinensis clone KBrH039G15, complete sequence.
FP340637.1:22334-22353
ATCTGAAACAAGATACCTAAGTAGCTTGCA22334CGGTGTCTCAGCCATTAATTTTGAAGGGTCGTGTTCATTCTGAATAAGCC
Brassica rapa subsp. pekinensis clone KBrH119E23, complete sequence.
FP340673.1:60160-60179
ATCTGAAACCAGATACCTAAGTAGCTTGCA60160CGGTGTCTCAGCCATTAATTTTGAAGGGTCGTGTTCATTCTGAATAAGCC
Brassica napus cultivar Xiang5A chromosome 12.
CP123887.1:6572004-6572023
ATCTGAAACCAGATACCTAACTAGCTTGCA6572004CGGTGTCTCAGCCATTAATTTTGAAGGGTCGTGTTCATTCTGAATAAAGC
Brassica napus genome assembly, chromosome: C06.
HG994370.1:6000105-6000124
ATCTGAAACCAGATACCTAACTAGCTTGCA6000105CGGTGTCTCAGCCATTAATTTTGAAGGGTCGTGTTCATTCTGAATAAAGC
Brassica oleracea HDEM genome, scaffold: C6.
LR031880.1:2913232-2913251
ATCTGAAACCAGATACCTAACTAGCTTGCA2913232CGGTGTCTCAGCCATTAATTTTGAAGGGTCGTGTTCATTCTGAATAAAGC
Raphanus sativus genome assembly, chromosome: 1.
OY743207.1:27900884-27900903
ATCTGAAACCAGATACCTAAGTAGCTTGCA27900884CGGTGTCTCAGCCATTAATTTTGAAGGGTCGTGTTCATTCTGAATAAGCC
Sequence 1 from Patent WO9417188.
A39595.1:7293-7312
GGCTTATTCAGAATGAACACGACCCTTCAA7293AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 2 from Patent WO9417188.
A39596.1:7293-7312
GGCTTATTCAGAATGAACACGACCCTTCAA7293AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 4716 from Patent EP2096177.
HB872041.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 4742 from Patent EP2096177.
HB872067.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 5044 from Patent EP2096177.
HB872369.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 5976 from Patent EP2096177.
HB873301.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 6002 from Patent EP2096177.
HB873327.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 6304 from Patent EP2096177.
HB873629.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 7847 from Patent EP2096177.
HB875172.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 7873 from Patent EP2096177.
HB875198.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 8175 from Patent EP2096177.
HB875500.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 12357 from Patent EP2096177.
HB879682.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 12383 from Patent EP2096177.
HB879708.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 12685 from Patent EP2096177.
HB880010.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 21092 from Patent EP2096177.
HB888417.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 21118 from Patent EP2096177.
HB888443.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 21420 from Patent EP2096177.
HB888745.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 53901 from Patent EP2096177.
HB921226.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 53927 from Patent EP2096177.
HB921252.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 54229 from Patent EP2096177.
HB921554.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 4716 from Patent EP2199304.
HC929450.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 4742 from Patent EP2199304.
HC929476.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 5044 from Patent EP2199304.
HC929778.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 5976 from Patent EP2199304.
HC930710.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 6002 from Patent EP2199304.
HC930736.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 6304 from Patent EP2199304.
HC931038.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 7847 from Patent EP2199304.
HC932581.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 7873 from Patent EP2199304.
HC932607.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 8175 from Patent EP2199304.
HC932909.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 12357 from Patent EP2199304.
HC937091.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 12383 from Patent EP2199304.
HC937117.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 12685 from Patent EP2199304.
HC937419.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 21092 from Patent EP2199304.
HC945826.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 21118 from Patent EP2199304.
HC945852.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 21420 from Patent EP2199304.
HC946154.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 53901 from Patent EP2199304.
HC978635.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 53927 from Patent EP2199304.
HC978661.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 54229 from Patent EP2199304.
HC978963.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 4716 from patent US 8541208.
HJ426861.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 4742 from patent US 8541208.
HJ426874.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 5044 from patent US 8541208.
HJ427025.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Sequence 5976 from patent US 8541208.
HJ427488.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 6002 from patent US 8541208.
HJ427501.1:2303-2322
GTTTACTTCAGAATGAACACGACCCTTCAA2303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Sequence 6304 from patent US 8541208.
HJ427652.1:2321-2340
GTTTACTTCAGAATGAACACGACCCTTCAA2321AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Brassica napus acc1.2 gene, exons 1-32.
AJ131865.1:6501-6520
GCTTTATTCAGAATGAACACGACCCTTCAA6501AATTAATGGCTGAGACACCGTGCAAGCTAGTTAGGTATCTGGTTTCAGAT
Brassica napus cultivar Xiang5A chromosome 10.
CP123885.1:4045936-4045955
GGCTTATTCAGAATGAACACGACCCTTCAA4045936AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Brassica napus cultivar AC Excel acetyl-coenzyme A carboxylase gene, partial cds.
DQ173668.1:3838-3857
GGCTTATTCAGAATGAACACGACCCTTCAA3838AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Brassica rapa cultivar Shogoin acetyl-coenzyme A carboxylase gene, partial cds.
DQ173669.1:3831-3850
GGCTTATTCAGAATGAACACGACCCTTCAA3831AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTTGTTTCAGAT
Brassica rapa subsp. chinensis acetyl-coenzyme A carboxylase gene, partial cds.
DQ173670.1:3824-3843
GGCTTATTCAGAATGAACACGACCCTTCAA3824AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTTGTTTCAGAT
Brassica rapa var. perviridis acetyl-coenzyme A carboxylase gene, partial cds.
DQ173671.1:3838-3857
GGCTTATTCAGAATGAACACGACCCTTCAA3838AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Brassica napus genome assembly, chromosome: A06.
HG994360.1:3016303-3016322
GGCTTATTCAGAATGAACACGACCCTTCAA3016303AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Brassica rapa genome, scaffold: A06.
LR031569.1:2976966-2976985
GGCTTATTCAGAATGAACACGACCCTTCAA2976966AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTTGTTTCAGAT
Raphanus sativus genome assembly, chromosome: 7.
LR778316.1:5261275-5261294
GGCTTATTCAGAATGAACACGACCCTTCAA5261275AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT
Brassica rapa genome assembly, chromosome: A06.
LS974622.2:3079689-3079708
GGCTTATTCAGAATGAACACGACCCTTCAA3079689AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTTGTTTCAGAT
B.napus ACCg8 gene.
X77576.1:7293-7312
GGCTTATTCAGAATGAACACGACCCTTCAA7293AATTAATGGCTGAGACACCGTGCAAGCTACTTAGGTATCTGGTTTCAGAT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGTGTCTCAGCCATTAATT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGTGTCTCAGCCATTAATT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.380 | 0.371 | search_plus_done; http://172.18.8.135:50400/match?q=CGGTGTCTCAGCCATTAATT&k=0&no_gap=0&offset=0&limit=50
1.624 | 1.244 | search_minus_done; http://172.18.8.135:50400/match?q=AATTAATGGCTGAGACACCG&k=0&no_gap=0&offset=0&limit=44
1.661 | 0.037 | cgi_end;

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