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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:26:57, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pyrus communis genome assembly, chromosome: 2.
OY757069.1:5389968-5389987
ATTTTCAAATAAAAATACTACTAAATTAAA5389968CGGTTTTGATCACTGATTTTCTTAATGTTATCTTATAGAATTTGTTCGAT
Staphylococcus aureus strain O267 chromosome, complete genome.
CP034102.1:1151526-1151545
TTATGATGTCTACCTAACATCTCTAAGGCT1151526CGGTTTTGATCACTGATTTTAGGCGACTTAGAAACAAGGTGTATATGTTC
Vibrio parahaemolyticus strain BM12B chromosome I, complete sequence.
CP129928.1:539845-539864
TTTTACCCAATTCAACTTATCCGAAGTGCA539845CGGTTTTGATCACTGATTTTGAGCACCGACTATAACTCGTTCCTGCCCCA
Vibrio parahaemolyticus strain BM23A chromosome I, complete sequence.
CP129934.1:519872-519891
TTTTACCCAATTCAACTTATCCGAAGTGCA519872CGGTTTTGATCACTGATTTTGAGCACCGACTATAACTCGTTCCTGCCCCA
Diatraea saccharalis genome assembly, chromosome: 8.
OU893339.1:6329728-6329747
ATTTTATATTCGATATAAGGGCAGAAGACC6329728CGGTTTTGATCACTGATTTTGACTATTTATTACGTTCTAACTCACAGGCT
Operophtera brumata genome assembly, chromosome: 1.
OW052225.1:72199471-72199490
GCCGTGTTTAGGTCAATTTTGATCAGCAAA72199471CGGTTTTGATCACTGATTTTATAAAAAGAAACAACAAAAATCAAATTTAC
Labrus bergylta genome assembly, chromosome: 11.
OZ005719.1:24316057-24316076
GGATTTTCTTAACAGGACGCAATGTGGACA24316057AAAATCAGTGATCAAAACCGATTTCTATATGACAATGCTCGAAAAACATT
Vibrio parahaemolyticus strain BM12B chromosome 1, complete sequence.
CP099932.1:2994599-2994618
TGGGGCAGGAACGAGTTATAGTCGGTGCTC2994599AAAATCAGTGATCAAAACCGTGCACTTCGGATAAGTTGAATTGGGTAAAA
Vibrio parahaemolyticus strain BM23A chromosome 1, complete sequence.
CP099941.1:2994958-2994977
TGGGGCAGGAACGAGTTATAGTCGGTGCTC2994958AAAATCAGTGATCAAAACCGTGCACTTCGGATAAGTTGAATTGGGTAAAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGGTTTTGATCACTGATTTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGGTTTTGATCACTGATTTT | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.172 | 0.163 | search_plus_done; http://172.18.8.135:50400/match?q=CGGTTTTGATCACTGATTTT&k=0&no_gap=0&offset=0&limit=50
0.268 | 0.096 | search_minus_done; http://172.18.8.135:50400/match?q=AAAATCAGTGATCAAAACCG&k=0&no_gap=0&offset=0&limit=44
0.270 | 0.002 | cgi_end;

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