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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 13:02:35, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Pipistrellus pipistrellus genome assembly, chromosome: 10.
LR862366.1:68844632-68844651
CCACGGACTGCCTGAGCCCGCAGATGAGTT68844632CGTAGGGAAGCAGAGGTGAAGGTGCATCATGAGACTAAATGCCAACGTTA
Rhinatrema bivittatum genome assembly, chromosome: 5.
LR584391.1:106807026-106807045
GTGTGTGTTGAATCCAGGAGGAGACTTGAT106807026CGTAGGGAAGCAGAGGTGAAGTCGGTCGTGTTAGTGATGGGGCCTGTCCT
TSA: Pyrus x bretschneideri Unigene18625_XinShao mRNA sequence.
JR613290.1:11-30
GGACGAACAT11CGTAGGGAAGCAGAGGTGAAAGTTCAAGCTGCAGTTGGGTTTCGTCATGT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141955.1:35047585-35047604
CATTTGTAGAAAGAGGTGAAGGATGAACAT35047585CGTAGGGAAGCAGAGGTGAAAGTTCAAGCGGCAGTTGGGTTTCGTCATGT
Malus hybrid cultivar cultivar Royalty chromosome 3.
CP141972.1:36158610-36158629
CATTTGTAGAAAGAGGTGAAGGATGAACAT36158610CGTAGGGAAGCAGAGGTGAAAGTTCAAGCGGCAGTTGGGTTTCGTCATGT
Malus x robusta genome assembly, chromosome: 5.
OY720329.1:38517926-38517945
CTTTTGCAGAAAGAGGTTAAGGATGAACAT38517926CGTAGGGAAGCAGAGGTGAAAGTTCAAGCTGCAGTTGGGTTTCGTCATGT
Crataegus laevigata genome assembly, chromosome: 6.
OY756943.1:38380207-38380226
CTTTTGCAGAAAGAGGTTAAGGACGAACAT38380207CGTAGGGAAGCAGAGGTGAAAGTTCAAGCTGCAGTTGGGTTTCGTCATGT
Pyrus communis genome assembly, chromosome: 8.
OY757075.1:25579703-25579722
CTTTTGCAGAAAGAGGTTAAGGACGAACAT25579703CGTAGGGAAGCAGAGGTGAAAGTTCAAGCTGCAGTTGGGTTTCGTCATGT
Malus hybrid cultivar cultivar Flame chromosome 3.
CP141912.1:1941567-1941586
ACATGACGAAACCCAACTGCCGATTGAACT1941567TTCACCTCTGCTTCCCTACGATGTTCATCCTTCACCTCTTTCTACAAATG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141920.1:2530028-2530047
ACATGACGAAACCCAACTGCAGCTTGAACT2530028TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus hybrid cultivar cultivar Flame chromosome 11.
CP141937.1:2612238-2612257
ACATGACGAAACCCAACTGCAGCTTGAACT2612238TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141963.1:2691944-2691963
ACATGACGAAACCCAACTGCAGCTTGAACT2691944TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus hybrid cultivar cultivar Royalty chromosome 11.
CP141980.1:2682588-2682607
ACATGACGAAACCCAACAGCAGCTTGAACT2682588TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAA
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143368.1:2598798-2598817
ACATGACGAAACCCAACTGCAGCTTGAACT2598798TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus hybrid cultivar cultivar SH6 chromosome 3.
CP143377.1:1857169-1857188
ACATGACGAAACCCAACTGCCGCTTGAACT1857169TTCACCTCTGCTTCCCTACGATGTTCATCCTTCACCTCTTTCTACAAATG
Malus hybrid cultivar cultivar SH6 chromosome 11.
CP143385.1:2610890-2610909
ACATGACGAAACCCAACTGCAGCTTGAACT2610890TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus sylvestris genome assembly, chromosome: 3.
OU696505.1:2179380-2179399
ACATGACGAAACCCAACTGCCGCTTGAACT2179380TTCACCTCTGCTTCCCTACGATGTTCATCCTTCACCTCTTTCTACAAATG
Malus sylvestris genome assembly, chromosome: 11.
OU696513.1:2706508-2706527
ACATGACGAAACCCAACTGCAGCTTGAACT2706508TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus domestica genome assembly, chromosome: 3.
OU696679.1:2201209-2201228
ACATGACGAAACCCAACTGCCGCTTGAACT2201209TTCACCTCTGCTTCCCTACGATGTTCATCCTTCTCCTCTTTCTACAAATG
Malus domestica genome assembly, chromosome: 11.
OU696687.1:2694787-2694806
ACATGACGAAACCCAACTGCAGCTTGAACT2694787TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus domestica genome assembly, chromosome: 11.
OU744552.1:2771769-2771788
ACATGACGAAACCCAACTGCAGCTTGAACT2771769TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus domestica genome assembly, chromosome: 11.
OU744963.1:2811721-2811740
ACATGACGAAACCCAACTGCAGCTTGAACT2811721TTCACCTCTGCTTCCCTACGATGTTCATCCTTAACCTCTTTCTGCAAAAG
Malus domestica genome assembly, chromosome: 3.
OU744993.1:2093486-2093505
ACATGACGAAACCCAACTGCCGCTTGAACT2093486TTCACCTCTGCTTCCCTACGATGTTCATCCTTCACCTCTTTCTACAAATG
Malus x robusta genome assembly, chromosome: 6.
OY720330.1:2008288-2008307
ACATGACGAAACCCAACTGCCGCTTGAACT2008288TTCACCTCTGCTTCCCTACGATGTTCATCCTTCACCTCTTTCTACAAATG
Pyrus communis genome assembly, chromosome: 14.
OY757081.1:1724136-1724155
ACATGACGAAACCCAACTGCAGCTTGAACT1724136TTCACCTCTGCTTCCCTACGATGTTCATCCTTCACCTCTTTCTACAAATG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTAGGGAAGCAGAGGTGAA
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTAGGGAAGCAGAGGTGAA | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.181 | 0.172 | search_plus_done; http://172.18.8.135:50400/match?q=CGTAGGGAAGCAGAGGTGAA&k=0&no_gap=0&offset=0&limit=50
0.294 | 0.113 | search_minus_done; http://172.18.8.135:50400/match?q=TTCACCTCTGCTTCCCTACG&k=0&no_gap=0&offset=0&limit=42
0.305 | 0.011 | cgi_end;

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