GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-03-17 16:15:02, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

GM700013A20D10 Gm-r1070 Glycine max cDNA clone Gm-r1070-5156 3', mRNA sequence.
BE820963.1:359-378
TAAACACACACATGTCATGTTAATTGGGTT359CGTATCTTTGGCTTTGCACAGAACGTGCAACATGAGGAAACAAGAGAAGC
Glycine max cultivar Williams 82 chromosome 4.
CP126429.1:6206238-6206257
TAAACACACACATGTCATGTTAATTGGGTT6206238CGTATCTTTGGCTTTGCACAGAACGTGCAACATGAGGAAACAAGAGAAGC
Miltochrista miniata genome assembly, chromosome: 13.
OW121760.1:7187620-7187639
AATTAAACCTGGAAATTACTTCGTATTTTT7187620CGTATCTTTGGCTTTGCACAGTAACGATATTGCCAATGAAAATTCACTTC
sh82f05.y1 Gm-c1016 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1016-6682 5', mRNA sequence.
AW432763.1:98-117
GCTTCTCTTGTTTCCTCATGTTGCACGTTC98TGTGCAAAGCCAAAGATACGAACCCAATTAACATGACATGTGTGTGTTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTATCTTTGGCTTTGCACA
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTATCTTTGGCTTTGCACA | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.137 | 0.128 | search_plus_done; http://172.18.8.135:50400/match?q=CGTATCTTTGGCTTTGCACA&k=0&no_gap=0&offset=0&limit=50
0.170 | 0.033 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGCAAAGCCAAAGATACG&k=0&no_gap=0&offset=0&limit=47
0.171 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
This page is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).