GGGenome | Results

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2025-03-16 17:22:11, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and in~~dels~~ are marked in red.

GM700013A20D10 Gm-r1070 Glycine max cDNA clone Gm-r1070-5156 3', mRNA sequence.
BE820963.1:359-378

TAAACACACACATGTCATGTTAATTGGGTT359CGTATCTTTGGCTTTGCACAGAACGTGCAACATGAGGAAACAAGAGAAGC

Glycine max cultivar Williams 82 chromosome 4.
CP126429.1:6206238-6206257

TAAACACACACATGTCATGTTAATTGGGTT6206238CGTATCTTTGGCTTTGCACAGAACGTGCAACATGAGGAAACAAGAGAAGC

Miltochrista miniata genome assembly, chromosome: 13.
OW121760.1:7187620-7187639

AATTAAACCTGGAAATTACTTCGTATTTTT7187620CGTATCTTTGGCTTTGCACAGTAACGATATTGCCAATGAAAATTCACTTC

sh82f05.y1 Gm-c1016 Glycine max cDNA clone GENOME SYSTEMS CLONE ID: Gm-c1016-6682 5', mRNA sequence.
AW432763.1:98-117

GCTTCTCTTGTTTCCTCATGTTGCACGTTC98TGTGCAAAGCCAAAGATACGAACCCAATTAACATGACATGTGTGTGTTTA

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Tab-delimited text: Open in new window | Download
You can copy-paste the result into spreadsheet softwares (e.g. Excel) or text editors.
CSV format: Open in new window | Download
You can open CSV files using spreadsheet softwares (e.g. Excel) or text editors.
BED format: Link | Download
GFF format: Link | Download
JSON format: Link | Download

Debug Info:

0.009 | 0.009 | search_start;
0.100 | 0.091 | search_plus_done; http://172.18.8.135:50400/match?q=CGTATCTTTGGCTTTGCACA&k=0&no_gap=0&offset=0&limit=50
0.125 | 0.024 | search_minus_done; http://172.18.8.135:50400/match?q=TGTGCAAAGCCAAAGATACG&k=0&no_gap=0&offset=0&limit=47
0.125 | 0.001 | cgi_end;

GGGenome by @meso_cacase at DBCLS
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