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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 11:28:46, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Citrus unshiu mRNA, clone:pcMOvA051921, expressed in ovary.
AU186216.1:282-301
TTCAGTTCGGTTTTAGAATATCTACGTTAC282CGTCCTCTTGCTTCTGCTCTCAAAACTGAAGATTTAGTTATCGTCGTTTC
Citrus sinensis genome assembly, chromosome: 2.
OY754319.1:31086660-31086679
TTCAGTTTGGTTTTAGAATATCTACGTTAC31086660CGTCCTCTTGCTTCTGCTCTCAAAACTGAAGATTTAGTTATCGTCGTTTC
Melolontha melolontha genome assembly, chromosome: 1.
OW285235.1:229399938-229399957
GTGGGTTTTTTTCTTTCTCCTGGCCTCACC229399938CGTCCTCTTGCTTCTGCTCTTTATTTTTTTCGTCTTTTTCGTTCTTTTTT
USDA-FP_116000-844 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-25_A10 5', mRNA sequence.
CF418907.1:40-59
GAAACGACGATAACTAAATCTTCAGTTTCG40AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
USDA-FP_117000-935 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-19_H06 5', mRNA sequence.
CF419994.1:40-59
GAAACGACGATAACTAAATCTTCAGTTTCG40AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
USDA-FP_118000-851 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-5T3_B02 5', mRNA sequence.
CF420848.1:40-59
GAAACGACGATAACTAAATCTTCAGTTTCG40AGAGCAGAAGCAAGAGGACGGTAACCGTAGATATTCTAAAACCAAACTGA
USDA-FP_118000-974 Immature Ovaries from field collected Flying Dragon Trifoliate Orange Citrus trifoliata cDNA clone TFF-27_A04 5', mRNA sequence.
CF420971.1:146-165
GAAACGACGATAACTAAATCTTCAGTTTTG146AGAGCAGAAGCAAGAGGACGGTAACCGTAGATATTCTAAAACCAAACTGA
EST021460 Trichophyton rubrum cDNA library 6 Trichophyton rubrum cDNA clone plasmid:FUNGI_8_013B_36, mRNA sequence.
DW697979.1:22-41
GGGTCGACCCACGCGTCCGAG22AGAGCAGAAGCAAGAGGACGAAGAGCAGAAGACACGGCGTATCGCCTGCG
IC0AAA13CG05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY264129.1:68-87
GAAACGACGATAACTAAATCTTCAGTTTTG68AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
IC0AAA14AF06RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY264295.1:105-124
GAAACGACGATAACTAAATCTTCAGTTTTG105AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
IC0AAA50BD11RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY280128.1:219-238
GAAACGACGATAACTAAATCTTCAGTTTTG219AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
IC0AAA81AA02RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY292802.1:18-37
CTAAATCTTCAGTTTTG18AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
IC0AAA87DG04RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY295312.1:142-161
GAAACGACGATAACTAAATCTTCAGTTTTG142AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
IC0AAA96BD05RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY298715.1:79-98
GAAACGACGATAACTAAATCTTCAGTTTTG79AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
KN0AAQ6YG12RM1 CitNFL Citrus clementina cDNA 5', mRNA sequence.
DY303648.1:182-201
GAAACGACGATAACTAAATCTTCAGTTTTG182AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
CS00-C3-701-010-A11-CT.F Sweet orange fruit, development stadium (2 of 6) Citrus sinensis cDNA, mRNA sequence.
EY702610.1:109-128
AAACGACGATAACTAAATCTTCAGTTTTAG109AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
CR05-C3-700-055-B01-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY784656.1:67-86
AAACGACGATAACTAAATCTTGCAGTTTTG67AGAGCAGAAGCAAGAGGACGGTCACGTAGATATTCTAAAACCGAACTGAA
CR05-C3-700-040-A03-CT.F Mandarin fruit, development stadium (1 of 3) Citrus reticulata cDNA, mRNA sequence.
EY791080.1:48-67
GAACCTTTGATAACTAAATCTTCAGTTTTG48AGAGCAGAAGCAAGAGGACGGTCACGTAGATATTCTAAAACCGAACTGAA
IC0AAA96BD05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA96BD05, mRNA sequence.
FC879357.1:79-98
GAAACGACGATAACTAAATCTTCAGTTTTG79AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
IC0AAA14AF06RM1 IVIA1 Citrus clementina cDNA clone IC0AAA14AF06, mRNA sequence.
FC885162.1:105-124
GAAACGACGATAACTAAATCTTCAGTTTTG105AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
IC0AAA50BD11RM1 IVIA1 Citrus clementina cDNA clone IC0AAA50BD11, mRNA sequence.
FC885270.1:219-238
GAAACGACGATAACTAAATCTTCAGTTTTG219AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCAAACTGAA
IC0AAA81AA02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA81AA02, mRNA sequence.
FC889787.1:18-37
CTAAATCTTCAGTTTTG18AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
IC0AAA87DG04RM1 IVIA1 Citrus clementina cDNA clone IC0AAA87DG04, mRNA sequence.
FC893832.1:142-161
GAAACGACGATAACTAAATCTTCAGTTTTG142AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
KN0AAQ6YG12RM1 IVIA1 Citrus clementina cDNA clone KN0AAQ6YG12, mRNA sequence.
FC897726.1:182-201
GAAACGACGATAACTAAATCTTCAGTTTTG182AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
IC0AAA13CG05RM1 IVIA1 Citrus clementina cDNA clone IC0AAA13CG05, mRNA sequence.
FC913815.1:68-87
GAAACGACGATAACTAAATCTTCAGTTTTG68AGAGCAGAAGCAAGAGGACGGTAACGTAGATATTCTAAAACCGAACTGAA
Arachis hypogaea cultivar Shitouqi chromosome A03.
CP030985.1:129110203-129110222
TCAAGAAGTACCTGCATCGAGAATAGAAAG129110203AGAGCAGAAGCAAGAGGACGAAGAAGTAATTTCAGTACTCATCAAAGTGA
Dendrolimus pini genome assembly, chromosome: 5.
OX457129.1:3745435-3745454
GACCTCAGACGAGGACTCTGAAGAGGAGCA3745435AGAGCAGAAGCAAGAGGACGAGGAGCAGGAGGACGAGCCCACCAAAGAGG
Ceriagrion tenellum genome assembly, chromosome: 11.
OY720643.1:121028103-121028122
GGTGGAGACTGATGTGGCGAGGGACGCGGA121028103AGAGCAGAAGCAAGAGGACGGGATGAAGGGATATGGTGAGGGAGGATAAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTCCTCTTGCTTCTGCTCT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTCCTCTTGCTTCTGCTCT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.169 | 0.160 | search_plus_done; http://172.18.8.135:50400/match?q=CGTCCTCTTGCTTCTGCTCT&k=0&no_gap=0&offset=0&limit=50
1.327 | 1.158 | search_minus_done; http://172.18.8.135:50400/match?q=AGAGCAGAAGCAAGAGGACG&k=0&no_gap=0&offset=0&limit=47
1.343 | 0.017 | cgi_end;

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