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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 19:28:53, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

BN25.045D12F020108 BN25 Brassica napus cDNA clone BN25045D12, mRNA sequence.
CD822443.1:223-247
AAGCCCACAAATAACACTTGTTATCTAAGT223CGTGATGCTGGAATCATCCCTCCTTTGTGCAATCCTGAGGATGACCCAGACAGTG
Brassica napus cultivar Xiang5A chromosome 5.
CP123880.1:1443597-1443621
AAGCCCACAAATAACACTTGTTATCTAAGT1443597CGTGATGCTGGAATCATCCCTCCTTTGTGCAATCCTGAAGATGACCCAGACAGTG
Brassica napus cultivar Xiang5A chromosome 16.
CP123891.1:2304748-2304772
AAGCCCACAAATAACACTTGTTATCTAAGT2304748CGTGATGCTGGAATCATCCCTCCTTTGTGCAATCCTGAGGATGACCCAGACAGTG
BOGAL10TF BOGA Brassica oleracea genomic clone BOGAL10, genomic survey sequence.
BH248866.1:537-561
CACTGTCTGGGTCATCCTCAGGATTGCACA537AAGGAGGGATGATTCCAGCATCACGACTTAGATAACAAGTGTTATTTGTGGGCTT
Brassica napus genome assembly, chromosome: A10.
HG994364.1:19309527-19309551
CACTGTCTGGGTCATCTTCAGGATTGCACA19309527AAGGAGGGATGATTCCAGCATCACGACTTAGATAACAAGTGTTATTTGTGGGCTT
Brassica napus genome assembly, chromosome: C09.
HG994373.1:63067214-63067238
CACTGTCTGGGTCATCCTCAGGATTGCACA63067214AAGGAGGGATGATTCCAGCATCACGACTTAGATAACAAGTGTTATTTGTGGGCTT
Brassica rapa genome, scaffold: A10.
LR031577.1:16232630-16232654
CACTGTCTGGGTCATCTTCAGGATTGCACA16232630AAGGAGGGATGATTCCAGCATCACGACTTAGATAACAAGTGTTATTTGTGGGCTT
Brassica oleracea HDEM genome, scaffold: C9.
LR031875.1:61128785-61128809
CACTGTCTGGGTCATCCTCAGGATTGCACA61128785AAGGAGGGATGATTCCAGCATCACGACTTAGATAACAAGTGTTATTTGTGGGCTT
Brassica rapa genome assembly, chromosome: A10.
LS974626.2:18966912-18966936
CACTGTCTGGGTCATCTTCAGGATTGCACA18966912AAGGAGGGATGATTCCAGCATCACGACTTAGATAACAAGTGTTATTTGTGGGCTT

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTGATGCTGGAATCATCCCTCCTT
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTGATGCTGGAATCATCCCTCCTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.164 | 0.155 | search_plus_done; http://172.18.8.135:50400/match?q=CGTGATGCTGGAATCATCCCTCCTT&k=0&no_gap=0&offset=0&limit=50
0.221 | 0.057 | search_minus_done; http://172.18.8.135:50400/match?q=AAGGAGGGATGATTCCAGCATCACG&k=0&no_gap=0&offset=0&limit=47
0.225 | 0.004 | cgi_end;

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