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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-12-16 10:58:53, GGGenome : DDBJ release 138.0 (Jun, 2025)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

EST1102398 Dulce mature fruit library Cucumis melo cDNA clone FR14O1, mRNA sequence.
DV633802.1:170-187
CGTCCTTTTGTTCAGAATTGAGATTCTTGA170CGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTCATTTAC
EST1102893 Tam Dew mature fruit library Cucumis melo cDNA clone FR16G19, mRNA sequence.
DV634297.1:139-156
CGTCCTTTTGTTCAGAATTGAGATTCTTGA139CGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTTATTTAC
EST1103317 Tam Dew mature fruit library Cucumis melo cDNA clone FR17L23, mRNA sequence.
DV634721.1:181-198
CGTCCTTTTGTTCAGAATTGAGATTCTTGA181CGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTTATTTAC
TSA: Cucumis sativus var. sativus cultivar Vlaspik CuSa200910_9133, mRNA sequence.
JW927298.1:221-238
CGTCCTTTTGTTCAGAATTGAGATTCTTGA221CGTGCATCGTGTAGAGAGCAATCAAAGAAAGGCGTCAGACTCATTTAC
Volucella bombylans genome assembly, chromosome: 1.
OX422140.1:118470324-118470341
CATTCGCTAATTTCTTTACATATACAAGTC118470324CGTGCATCGTGTAGAGAGAAAAAAGTTGTTTCTTTCGTCTGAGACCGA
Cucumis melo isolate PI 511890 chromosome 8.
CP136107.1:4326321-4326338
GTAAATGAGTCTGACGCCTTTCTTTGATTG4326321CTCTCTACACGATGCACGTCAAGAATCTCAATTCTGAACAAAAGGACG
Cucumis melo genomic scaffold, anchoredscaffold00007.
LN681875.1:4325389-4325406
GTAAATGAGTCTGACGCCTTTCTTTGATTG4325389CTCTCTACACGATGCACGTCAAGAATCTCAATTCTGAACAAAAGGACG
Cucumis melo genomic chromosome, chr_8.
LN713262.1:4325389-4325406
GTAAATGAGTCTGACGCCTTTCTTTGATTG4325389CTCTCTACACGATGCACGTCAAGAATCTCAATTCTGAACAAAAGGACG
Fraxinus pennsylvanica genome assembly, chromosome: 1.
OU503036.1:32155996-32156013
TCTCTCTATATATCATCCATTATCCTTTCT32155996CTCTCTACACGATGCACGCTCACAAATTCACAATGGCATCGCAACTAT
Bromus sterilis genome assembly, chromosome: 3.
OX465597.1:392725100-392725117
GCCCCACCACATCATCTTCCCCGTGAGACT392725100CTCTCTACACGATGCACGAGTAACGATATTTCTCCGCCCCAGGACCCC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTGCATCGTGTAGAGAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTGCATCGTGTAGAGAG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.475 | 0.466 | search_plus_done; http://172.18.8.135:50800/match?q=CGTGCATCGTGTAGAGAG&k=0&no_gap=0&offset=0&limit=50
0.618 | 0.143 | search_minus_done; http://172.18.8.135:50800/match?q=CTCTCTACACGATGCACG&k=0&no_gap=0&offset=0&limit=45
0.621 | 0.003 | cgi_end;

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