GGGenome Help | Japanese

Database:
 

Max number of mismatches/gaps mismatches : (no more than 25% of the query length)
Search for: both strand plus strand minus strand

2025-04-19 17:11:44, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

Matches are highlighted with blue background. Mismatches and indels are marked in red.

Lutzomyia longipalpis isolate SR_M1_2022 chromosome 1.
CP101402.1:4817196-4817215
ATTCAACATGGACAAAATGTAATTAACACG4817196CGTGTTGCAATTAATTTGTTTATTTGCAATTATTTTCAGGACCTTTACCC
Pollenia angustigena genome assembly, chromosome: 2.
OV884057.1:55011702-55011721
TTTAAAGATGTTTTATATTATCCGAATGAA55011702CGTGTTGCAATTAATTTGTTTCTTGTTGTCTTTAAACGTTAGCGTTTTTT
Eupithecia subumbrata genome assembly, chromosome: 18.
OX438633.1:13805740-13805759
ACCAAAAAGTGCAATTGTTCATTTCTCAGG13805740CGTGTTGCAATTAATTTGTTTGCATAACATTAAGATTATGTAAATTTATA
Epinotia brunnichana genome assembly, chromosome: 13.
OY977948.1:10428602-10428621
GATTTAGTTACTTGTAAGTAATAGGTGAGA10428602CGTGTTGCAATTAATTTGTTTAGTAACTTTCCGAAGACATTAATTAATCC
Lotus japonicus genomic DNA, chromosome 1, clone: LjT34H22, TM1168.
AP010162.1:45710-45729
AACACATAACAAATAGAAAAAGAAAAAAAA45710AACAAATTAATTGCAACACGAAAAGTAATGTAGAGTCACCGAATATCATC
Lotus japonicus B-129 DNA, chromosome 1, complete sequence.
AP022629.1:103814240-103814259
AACACATAACAAATAGAAAAAGAAAAAAAA103814240AACAAATTAATTGCAACACGAAAAGTAATGTAGAGTCACCGAATATCATC
1_Tdi_b3v08.
OA566044.1:110874-110893
ATGTCTAATTGTAGTGTTTTTAATGAAACA110874AACAAATTAATTGCAACACGTAATAAAATATATATAATTAATGTTATTTT
Xanthogramma pedissequum genome assembly, chromosome: 2.
OU343161.1:165828340-165828359
AAAAAAAGTTTTAATTTACGACCAAAATAT165828340AACAAATTAATTGCAACACGCATTCAAATTAACAAATGGAATATTATTTA
Pollenia angustigena genome assembly, chromosome: 4.
OV884059.1:53076424-53076443
AAAAAACGGTAACGTTTAAAGACAACAAGA53076424AACAAATTAATTGCAACACGTTCATTCGGATAATATAAAACATCTTTAAA
Hipparchia semele genome assembly, chromosome: 11.
OW121719.1:744582-744601
TAATCAGGTGCCCATTTGCATGTCCTGCGC744582AACAAATTAATTGCAACACGATATTAAAGCGATAATGATGAGTTGCCATG
Coelioxys conoideus genome assembly, chromosome: 9.
OX392457.1:7793651-7793670
ATGGTCAAACATAATATAATATAGATTATT7793651AACAAATTAATTGCAACACGTTGATCTAAAATTTTATTTCAATGCGGTTC
Eupithecia subfuscata genome assembly, chromosome: 23.
OY751119.1:4688106-4688125
TACAAATTTACATAATCTTAATGTTATGCA4688106AACAAATTAATTGCAACACGACTGAGAAATGAACAATTACACTTTTTGGT

Data Export:

Maximum 100000 results can be retrieved in various formats shown below:

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/en/ddbj/CGTGTTGCAATTAATTTGTT
lang : en | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTGTTGCAATTAATTTGTT | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.093 | 0.084 | search_plus_done; http://172.18.8.135:50400/match?q=CGTGTTGCAATTAATTTGTT&k=0&no_gap=0&offset=0&limit=50
0.132 | 0.040 | search_minus_done; http://172.18.8.135:50400/match?q=AACAAATTAATTGCAACACG&k=0&no_gap=0&offset=0&limit=46
0.138 | 0.005 | cgi_end;

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