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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 15:46:05, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Eptesicus nilssonii genome assembly, chromosome: 7.
OX621286.1:20913592-20913611
CCTTTTTTAGTGGAGAGGAGGATACGTATA20913592CGTGTTTGTGTTTTTGCTGGCTGGAAGATGACAAATTGTATAGTTCAGTG
Myotis daubentonii genome assembly, chromosome: 3.
OY725361.1:135333157-135333176
GGGGGGTGGGAGGGGAGGAGGATATGTCCA135333157CGTGTTTGTGTTTTTGCTGGCTGGAAGATGACAAATTGTATAGTTCAGTG
Epinephelus fuscoguttatus DNA, LG22, complete sequence.
AP022696.1:33717780-33717799
ACAGCTCGCACCAACAGCTGACGTTGCTCT33717780CGTGTTTGTGTTTTTGCTGGCTAGTGAAAAATCCTGGTACAGGCTATTTA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143365.1:542029-542048
GTACGTAATTCAATTTTTAGTTTTGATTAA542029CGTGTTTGTGTTTTTGCTGGTGCTGCAGCCTGAAGAGAGAGAGAGATATA
Malus hybrid cultivar cultivar SH6 chromosome 8.
CP143382.1:506135-506154
GTACGTAATTCAATTTTTAGTTTTGATTAA506135CGTGTTTGTGTTTTTGCTGGTGCTGCAGCCTGGAGAGAGAGATATATATA
Malus sylvestris genome assembly, chromosome: 8.
OU696510.1:556963-556982
GTACGTAATTCAATTTTTAGTTTTGATTAA556963CGTGTTTGTGTTTTTGCTGGTGCTGCAGCCTGGAGAGAGAGAGATATATA
Malus domestica genome assembly, chromosome: 8.
OU696684.1:583596-583615
GTACGTAATTCAATTTTTAGTTTTGATTAA583596CGTGTTTGTGTTTTTGCTGGTGCTGCAGCCTGGAGAGAGAGAGAGAGAGA
Malus domestica genome assembly, chromosome: 8.
OU744549.1:569003-569022
GTACGTAATTCAATTTTTAGTTTTGATTAA569003CGTGTTTGTGTTTTTGCTGGTGCTGCAGCCTGAAGAGAGAGAGAGAGATA
Malus domestica genome assembly, chromosome: 8.
OU744960.1:573244-573263
GTACGTAATTCAATTTTTAGTTTTGATTAA573244CGTGTTTGTGTTTTTGCTGGTGCTGCAGCCTGAAGAGAGAGAGAGAGATA
Malus domestica genome assembly, chromosome: 8.
OU744998.1:539064-539083
GTACGTAATTCAATTTTTAGTTTTGATTAA539064CGTGTTTGTGTTTTTGCTGGTGCTGCAGCCTGAAGAGAGAGAGAGATATA
Malus x robusta genome assembly, chromosome: 16.
OY720340.1:534282-534301
GTACGTAATTCAATTTTTAGTTTTGATTAA534282CGTGTTTGTGTTTTTGCTGGTGCTGCGGCCTGGAGAGAGAGATATATATA
Bacillus methanolicus MGA3, complete genome.
CP007739.1:1304798-1304817
TAAAAAGATAGGAGAGTAATAACTATGAAG1304798CGTGTTTGTGTTTTTGCTGGATCTAATCCTGGAACCCATCCCGAGTATAA
Bacillus methanolicus strain DFS2 chromosome, complete genome.
CP026143.1:1355524-1355543
TAAAAAGATAGGAGAGTAATAACTATGAAG1355524CGTGTTTGTGTTTTTGCTGGATCTAATCCTGGAACCCATCCCGAGTATAA
Epicampocera succincta genome assembly, chromosome: 4.
OW052037.1:45394382-45394401
GTACGCCTTATTATTGCTTATGTCGGTGTT45394382CGTGTTTGTGTTTTTGCTGGCCTTGGTTTTTTCTTTAATATTTTTTGTAT
Carpatolechia fugitivella genome assembly, chromosome: 10.
OX579655.1:12855331-12855350
GAAAGTTTAAATTCGATGACACTAATTTGT12855331CGTGTTTGTGTTTTTGCTGGAGCTACTCAAAGTATTTGTAAACATCTCAT
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141917.1:28950796-28950815
TATATATCTCTCTCTCTCCAGGCTGCAGCA28950796CCAGCAAAAACACAAACACGTTAATCAAAACTAAAAATTGAATTACGTAC
Malus hybrid cultivar cultivar Flame chromosome 8.
CP141934.1:30704321-30704340
TATATATCTCTCTCTCTCCAGGCTGCAGCA30704321CCAGCAAAAACACAAACACGTTAATCAAAACTAAAAATTGAATTACGTAC
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141960.1:29286092-29286111
TATATATATCTCTCTCTCCAGGCTGCAGCA29286092CCAGCAAAAACACAAACACGTTAATCAAAACTAAAATTTGAATTACGTAC
Malus hybrid cultivar cultivar Royalty chromosome 8.
CP141977.1:29215016-29215035
TATCTCTCTCTCTCTCTTCAGGCTGCAGCA29215016CCAGCAAAAACACAAACACGTTAATCAAAACTAAAAATTGAATTACGTAC
Pollenia labialis genome assembly, chromosome: 1.
OX439139.1:165287657-165287676
CAAAATAAACATACGAAAAAAAACAAAAGG165287657CCAGCAAAAACACAAACACGATATATATATATATATATATATATATATAA
Meandrina meandrites genome assembly, chromosome: 4.
OY855906.1:5456223-5456242
CCCATTTTGCACACCACAGTTACCATAAAC5456223CCAGCAAAAACACAAACACGAAAAACAGGCTAAATGCGTACCTTAAACAA

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/CGTGTTTGTGTTTTTGCTGG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : CGTGTTTGTGTTTTTGCTGG | format : html | download : | debug : 

0.009 | 0.009 | search_start;
0.150 | 0.141 | search_plus_done; http://172.18.8.135:50400/match?q=CGTGTTTGTGTTTTTGCTGG&k=0&no_gap=0&offset=0&limit=50
0.257 | 0.107 | search_minus_done; http://172.18.8.135:50400/match?q=CCAGCAAAAACACAAACACG&k=0&no_gap=0&offset=0&limit=35
0.261 | 0.004 | cgi_end;

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